Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2834g00043 ATGGTGCTGATTTTTCATCGTCTATATCCTCATACACTGAAGTTGATACTATTGATTGCTCTGTGTACTTTATCAGATTGCTATGACCCGTGGGATCCAAATGGTAACATTTCTGTAACTTTTGACATTTACCAACGGACAGACAATGGATATCTGGGAAGGGTGACCCTTCAAAACTATTATCAATATCGCCATGTAGACAAACCTGGGTGGAAACTAGGATGGATATGGGCTAACAGTGAAGTGATATGGTCAATGAATGGTGCCGTTGCAACTGATAGAGGGAATTGCTCATCTTACAGCGGCTCTCAGATGCCACATTCTTGCAAGAAAGATCCCATCATAGTTGATCTCACTCCAGATGTCACAAAAAACAGGTCAGAGCATTGCTGTAATGGTGGCCTCCTCTCTGCATGGGCTATTGATCCTTTGAAGTCATTCTCTTTATTTGAACTTGAAGTTCGCAACTTGGGGGGAAACCCACTTGGACAAGCACCTAATAATCTTACATTGATGGCCCCAGGTCCTGGTTACACTTGTAGTCCACTTCTGGATGTTGATCCCACTGTTTCCTCAGATTCTGGGGGACGAAGACAAGTTCCAGCTATCAGAACTTGGAAGTCAACATGTACGTACTCCAGTTTCGTAGCAAATACATCACCATTATGCTGTGTTTCCCTCTCAACATTTTACAACCCTGCTATCACTTCATGCCGTAATTGCAGTTGTGGGTGTCCAGAATCAGATGAAAGTACAGGGCCTTGCATAAGGCCAGGTGATCCCTTGCCACAGTCAAATGAGGACAACATAATAGAATGCACTAAGCACATGTGCCCAATTCGAGTCCATTGGCATTTCAAGAACAACTATGTGGATCATTGGAGGGTGAAGCTAACAATTTCTAACTACAACTATAATAGAAACTATTCAAACTGGAACGTACTGGTTCAACATCCTGGTTTAAGCCAAAATGCAATAACTTACAGCTTCAACAGTACTAAACTTCCGGCCCTTGGGCTCCAAGATGGAGTTTCCCTTTATTGGGGGATAGATTTTTACAACAGTGAGTTATTGCATTCAGATAAAGATCAACTGAGGATGGTGACAACAGATATAATATTGGAAAAAGATCCAAATTCTTTCACATTAAGTAACGGATGGGCATTTCCGAGAAGAGTATATTTCAATGGCGAGAACTGTGAAATGCCTTTACCGGATACATTCCCTATGTTACCAAATGGTAGCTCAAGACCAACAACTTACTCATGTGGTTTCAATCCCTTATTAATATCTTTGTTTCTTGCCCTAGCATTCCTTTGGTTTTGA 1326 0.4155 MVLIFHRLYPHTLKLILLIALCTLSDCYDPWDPNGNISVTFDIYQRTDNGYLGRVTLQNYYQYRHVDKPGWKLGWIWANSEVIWSMNGAVATDRGNCSSYSGSQMPHSCKKDPIIVDLTPDVTKNRSEHCCNGGLLSAWAIDPLKSFSLFELEVRNLGGNPLGQAPNNLTLMAPGPGYTCSPLLDVDPTVSSDSGGRRQVPAIRTWKSTCTYSSFVANTSPLCCVSLSTFYNPAITSCRNCSCGCPESDESTGPCIRPGDPLPQSNEDNIIECTKHMCPIRVHWHFKNNYVDHWRVKLTISNYNYNRNYSNWNVLVQHPGLSQNAITYSFNSTKLPALGLQDGVSLYWGIDFYNSELLHSDKDQLRMVTTDIILEKDPNSFTLSNGWAFPRRVYFNGENCEMPLPDTFPMLPNGSSRPTTYSCGFNPLLISLFLALAFLWF 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2834g00043 441 Pfam COBRA-like protein 51 213 IPR006918 GO:0010215|GO:0016020
Gabi2834g00043 441 PIRSF COBRA 1 440 IPR006918 GO:0010215|GO:0016020
Gabi2834g00043 441 PANTHER PROTEIN COBRA 16 418 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2834g00043 Gabi-Chr2834 318740 321491 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2834g00043 8 439 COBRA Gene Family AT3G02210 45.169 4.83e-137 399
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2834g00043 - - vra:106760500 706.057