Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2834g00030 ATGGCTGCGCCAAATCTTTGTACCCTGTCTTCCTCTTTCCTCTGCAAATCATTGTCTTTCCCTTTCAACGCCAACACTTGTTTTTCCCTCCAAAACCCTACCTCGTTTCCCAAAACCGCTCTTTCTAACGCCGCCTCCGAGTCCCATAAAACACCTTTCCCAGTTTCAGTTTCATGCAAAAACCAAATTTCTGCAGAGGTTTTGCACGATGATGATGATGACGAAAAGCCACGCGAAGAGTGCGGTGTGGTGGGTATATACGGTGATCCAGATGCATCTCGTCTATGCTGTCTGGCCCTGCGCGCTCTCCAGCACCGTGGCCAAGAAGGTGCTGGGATTGTTGCTGTTCATAACAACGTTCTTCAATCTGTAACTGGTGTTGGTCTTGTCGCTGAAGTGTTCAACGAGTCCAAGCTTCATCAGTTAACTGGAACTTTGGCTATTGGCCATGTTCGCTACTCAACTGCAGGCCAATCCATGCTCAAGAATGTTCAACCTTTCGTTGCAGGGTATCGCTTTGGCTCTGTTGGGGTTGCTCATAATGGCAATTTGGTCAATTATCGCTCCTTAAGGGCCAAACTTGAAGACAATGGGTCGATTTTTAACACGAGTTCTGATACTGAGGTTGTGCTCCATCTTATTGCCACCTCAAAGCACGGAGCTTTCATCTCGAGGATTGTTGATGCATGCGAGAAGCTTCAAGGGGCTTATTCTTTTGTGTTTGTTACTGAGGACAAGCTCATTGCTGTGAGGGATCCCTTTGGATTTCGACCCTTGGTTATGGGGAGGAGATGTAATGGTGCTGTTGTTTTTGCCTCCGAGACATGTGCCCTTGATTTGATTGAAGCCACATATGAGAGGGAGGTGTACCCTGGTGAAGTTGTGGTTGTTGACCAGAATGGGATTCAATCCTTTTGCCTAATGTCTCATCCACAGCCAAAGCAATGTATCTTTGAACACATATACTTTGCATTGCCCAATTCTGTGGTTTTTGGGAGGTCTGTGTATGAATCTCGCAGGAAATTCGGAGAAATACTGGCCACTGAAAGCCCTGTTGATTGTGATGTTGTGATAGCAGTTCCAGATTCTGGTGTGGTGGCTGCGCTTGGTTATGCTGCTAAGGCTGGGGTTCCTTTTCAGCAGGGGTTGATTAGGTCACACTATGTGAGGAGGACTTTCATTGAGCCTTCTCAGAAGATTAGGGACTTTGGCGTGAAGTTGAAGCTCTCACCGGTACGTGCTGTACTTGAAGGGAAGAGGGTTGTGGTTGTGGATGACTCAATTGTGAGGGGAACTACATCATCCAAAATTGTAAAGTTGATAAGGGAGGCAGGTGCCAAGGAAGTTCACATGAGGGTTGCATGCCCCCCAATTATAGGGTCATGTTACTATGGGGTGGACACACCAAGCTCGGAGGAGTTGATATCTAATAGGATGAGTGTTGATGAAATAAGGGAGTTTATTGGAGCGGATTCACTTGCTTTCCTTCCACTTGATAGCTTGAAGAAGTTGTTGGGTGATGATTCTCCCAATTTCTGTTATGCTTGCTTCTCTGGGATGTACCCTGTTGAACCCACAGAAATTAAAGTGAAGAGGGTTGGTGACTTTGTGGACGATGGCTTGAATGGGAGTGTCGAATCTATTGATGGGGTTTGGGTTCAACCAAACCGAAATCAGAAAGAGGTGAAGATCGTTAGTACCTGA 1704 0.4642 MAAPNLCTLSSSFLCKSLSFPFNANTCFSLQNPTSFPKTALSNAASESHKTPFPVSVSCKNQISAEVLHDDDDDEKPREECGVVGIYGDPDASRLCCLALRALQHRGQEGAGIVAVHNNVLQSVTGVGLVAEVFNESKLHQLTGTLAIGHVRYSTAGQSMLKNVQPFVAGYRFGSVGVAHNGNLVNYRSLRAKLEDNGSIFNTSSDTEVVLHLIATSKHGAFISRIVDACEKLQGAYSFVFVTEDKLIAVRDPFGFRPLVMGRRCNGAVVFASETCALDLIEATYEREVYPGEVVVVDQNGIQSFCLMSHPQPKQCIFEHIYFALPNSVVFGRSVYESRRKFGEILATESPVDCDVVIAVPDSGVVAALGYAAKAGVPFQQGLIRSHYVRRTFIEPSQKIRDFGVKLKLSPVRAVLEGKRVVVVDDSIVRGTTSSKIVKLIREAGAKEVHMRVACPPIIGSCYYGVDTPSSEELISNRMSVDEIREFIGADSLAFLPLDSLKKLLGDDSPNFCYACFSGMYPVEPTEIKVKRXVGDFVDDGLNGSVESIDGVWVQPNRNQKEVKIVST 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2834g00030 568 CDD GPATase_N 81 331 IPR035584 -
Gabi2834g00030 568 Pfam Glutamine amidotransferase domain 159 278 IPR017932 -
Gabi2834g00030 568 Pfam Phosphoribosyl transferase domain 340 455 IPR000836 -
Gabi2834g00030 568 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 81 300 IPR017932 -
Gabi2834g00030 568 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 81 522 IPR029055 -
Gabi2834g00030 568 CDD PRTases_typeI 343 454 IPR000836 -
Gabi2834g00030 568 Hamap Amidophosphoribosyltransferase [purF]. 80 521 IPR005854 GO:0004044|GO:0009113
Gabi2834g00030 568 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 81 305 IPR029055 -
Gabi2834g00030 568 Gene3D - 340 504 IPR029057 -
Gabi2834g00030 568 PANTHER AMIDOPHOSPHORIBOSYLTRANSFERASE 79 528 - -
Gabi2834g00030 568 NCBIfam amidophosphoribosyltransferase 81 522 IPR005854 GO:0004044|GO:0009113
Gabi2834g00030 568 SUPERFAMILY PRTase-like 316 528 IPR029057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2834g00030 Gabi-Chr2834 257400 259105 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2834g00030 69 555 PRT Gene Family AT2G16570 82.992 0.0 834
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2834g00030 K00764 - gmx:100791919 871.307