Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2834g00029 ATGGAAATGGACCAGGACGAGGAAGAGTGTCACCAAGGTCAAGGAAGCTCTGGAGTGGCTAAACAAACCCCAGAGCAACTCGTGGCTAGGGCCATAGCTCCTGTCAAGAAGGACTTCCTTCGTCCTCCTCCTGTTCGGGCTCCCTCTTCAAACGACGACGTTTCCCTCACCAACGATAAGGCTCCTGTTGTGGTTAAGGAGAAGAAGTCTAAGCGCCAGCTCAAACGCGAACGTCGTCAGGATCAAAAGTCAGCACGAAACCTGTGTCCGGAAATTGCAAAGACAGGTGATGTTAGTTCATGTCGTTACAAAGACAATTGTCGCTTCAGCCATGATTTAGAAGCCTTCAAGTCACAGAAACCAGCTGATCTAGAAGGAAAGTGTCCTTTCTTAAAATCTGAAGGCTCTTGCCCTTATGGCTTAGCGTGTAGATTTTCTAGTACGCATCAAGATGGTATTCCTTCTGGCAATCTGAATGGTCTGAAGAACAGTTCTGAGGTAAATGGGTTAAGCAAAGATGTTCAAAAGCTTTTGTGGAAAAATAAGATGAGCTTCGCCAAGGCAGATGCCAAACTCAAAAGTCTTGGCCTCGTGGGACTCTCCAAGTCGAAAAGGAATGACTTGGAAAATAAAGATGGGGGCAACACGGTTTCAAATAAATCCGATCATTCTGAAGACAATGGCTCTTGTGTAGTTACCTCCGACTCAGGCTCTAAGTTAGAATGCTCTGCAGAAGTTATAAAAGATGATGAATCAGATGGAAAATGTGAATCTAATGCACTTTGTCCCCAGAAGAGAAGAAAAACTGCGGAAAATTATGGTTCTGGGGAGACAGAAAATGAAGATGTGAGTGTTAATGAGCAAATTACTGAAAGTAGCTGCATAACATCTGAACCAGAAGCTGGAACTGATGTTACAACCCCAGAAACCGATCTAAGCCTGAAGTTGCACTCACGTGAAAAGAAGCTTATTGATTACAGGGAGAAGTTGTATCTTGCACCCTTGACCACTGTTGGAAATCTCCCTTTCCGGAGAGTTTGCAAAGTATTAGGAGCTGATGTAACATGTGGTGAAATGGCAATGTGCACAAATCTTTTGCAGGGTCAAGCTTCAGAATGGGCATTGCTGAGACGTCATTCATCTGAAGATTTATTTGGTGTACAAATCTGTGGGGCATATCCGGATACTGTGGCACGAACAGTTGAACTAATAGAGCAGGAATGTTCAATAGACTTTATTGATATAAATATGGGTTGCCCTATTGACATTGTTGTGAATAAGGGTGCTGGATCAGCTCTTCTTACAAAACCAATGCGGATGAAAAATATTGTAGCAGTAGCTTCAGGCACAGCGGACATACCAATAACTGTCAAGGTACGGACTGCTTATTTTGAAGGGAAGAACCGCATTGATTCTCTGATTGCAGACATTGGCTCTTGGGGAGCTAGTGCATTGACAATACATGGTAGGTCACGTCAGCAACGCTATAGCAAGCTTGCTGACTGGGACTACGTATACCAATGTGCCAGGAAGGCCCCTAATACTTTGCAAGTAGTGGGGAATGGAGATGTTTTTTCATTTGTAGACTGGAATAACCACAGAACTGAATGCCCTGAACTTGCTACGTGCATGATTGCTCGTGGTGCACTGATTAAACCTTGGATATTTACAGAGATCAAGGAACAGAGACATTGGGATATTAGTTCTTGCGAGCGACTAAATATTCTCAAAGATTTTGTTAATTTTGGCCTTCAGCACTGGGGTTCTGACACAAAAGGAGTGGAGACAACCAGGCGTTTCTTGTTGGAATGGCTTAGCTACGCTTGTAGGTACATACCTGTTGGTCTTTTGGATGTGGTTCCGCAACGATTAAATTGGCGTCCACCATCATACTATGGGCGTGATGAGCTTGAGACGCTGATGGCCTCGGACTCAGCAGCTGACTGGATACGAATATCAGAGATGTTACTTGGCAAGGTTCCAGATGGCTTTACATTTGCACCAAAGCATAAATCAAATGCTTACGATAGAGCTGAAAATGGTTGA 2046 0.4394 MEMDQDEEECHQGQGSSGVAKQTPEQLVARAIAPVKKDFLRPPPVRAPSSNDDVSLTNDKAPVVVKEKKSKRQLKRERRQDQKSARNLCPEIAKTGDVSSCRYKDNCRFSHDLEAFKSQKPADLEGKCPFLKSEGSCPYGLACRFSSTHQDGIPSGNLNGLKNSSEVNGLSKDVQKLLWKNKMSFAKADAKLKSLGLVGLSKSKRNDLENKDGGNTVSNKSDHSEDNGSCVVTSDSGSKLECSAEVIKDDESDGKCESNALCPQKRRKTAENYGSGETENEDVSVNEQITESSCITSEPEAGTDVTTPETDLSLKLHSREKKLIDYREKLYLAPLTTVGNLPFRRVCKVLGADVTCGEMAMCTNLLQGQASEWALLRRHSSEDLFGVQICGAYPDTVARTVELIEQECSIDFIDINMGCPIDIVVNKGAGSALLTKPMRMKNIVAVASGTADIPITVKVRTAYFEGKNRIDSLIADIGSWGASALTIHGRSRQQRYSKLADWDYVYQCARKAPNTLQVVGNGDVFSFVDWNNHRTECPELATCMIARGALIKPWIFTEIKEQRHWDISSCERLNILKDFVNFGLQHWGSDTKGVETTRRFLLEWLSYACRYIPVGLLDVVPQRLNWRPPSYYGRDELETLMASDSAADWIRISEMLLGKVPDGFTFAPKHKSNAYDRAENG 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2834g00029 681 MobiDBLite consensus disorder prediction 220 235 - -
Gabi2834g00029 681 Gene3D Aldolase class I 325 567 IPR013785 -
Gabi2834g00029 681 MobiDBLite consensus disorder prediction 204 219 - -
Gabi2834g00029 681 ProSitePatterns Uncharacterized protein family UPF0034 signature. 413 431 IPR018517 GO:0008033|GO:0017150|GO:0050660
Gabi2834g00029 681 CDD DUS_like_FMN 329 564 IPR035587 -
Gabi2834g00029 681 Pfam CCCH-type zinc finger 88 112 IPR041367 -
Gabi2834g00029 681 MobiDBLite consensus disorder prediction 1 88 - -
Gabi2834g00029 681 ProSiteProfiles Zinc finger C3H1-type profile. 127 152 IPR000571 GO:0046872
Gabi2834g00029 681 Gene3D - 78 154 - -
Gabi2834g00029 681 MobiDBLite consensus disorder prediction 204 235 - -
Gabi2834g00029 681 FunFam tRNA-dihydrouridine(47) synthase [NAD(P)(+)] 325 567 - -
Gabi2834g00029 681 Pfam Dihydrouridine synthase (Dus) 332 577 IPR035587 -
Gabi2834g00029 681 PANTHER TRNA-DIHYDROURIDINE(47) SYNTHASE [NAD(P)(+)]-LIKE 22 675 - -
Gabi2834g00029 681 SUPERFAMILY FMN-linked oxidoreductases 329 642 - -
Gabi2834g00029 681 MobiDBLite consensus disorder prediction 267 286 - -
Gabi2834g00029 681 ProSiteProfiles Zinc finger C3H1-type profile. 83 114 IPR000571 GO:0046872
Gabi2834g00029 681 FunFam tRNA-dihydrouridine(47) synthase [NAD(P)(+)] 79 157 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Gabi2834g00029 Dus 8.8e-49 CL0036
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2834g00029 K05544 - gmx:100783494 1184.09