Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2820g00041 ATGGAGGACAAGATAAATAAGAGAGTGATGGAAGATGTAGCAGTTATCGGAGGATTAATAGGAGTCCAATTTATCTACGCAGGGAACGCTGTGTTGATGGGTTATGTTATGTCATTGGGTCTCACCTCATTTACCATTATCATCTTCACCTCTCTCGCTGCATTCTTTATTCTCTTCCCCGTTGCCTTTTGTGTTGAAAGGAGAAAGTGGCCCAAGAATTGGAGTTTCAAGTTGATTATGCAGCTATTGTTTCTTTCATTTGGAGGATTAGCTTTCCAGACTTTATTACTCAAAGGAATCAATCTAGCTTCGCCAGCAATGGCAACTGCTATGCCAAATCTTGCCCCAGGCCTTATCTTCATCATCGCATGGACTTTCGGGTTAGAGAAAGTCAACTTAAGCAACAAGAATAGTAAAGTAAAAATCTTAGGAACATTGCTCTGTGTCATGGGCGCTCTCATAATGAGCATAATGCAAAGCATTTCTACTCCTGCAACCGAGAAAGAGGTTAAAATTCAATTATCATCGACACCATCAGATTCTATCTTTGACATGCAGAAGATAATCGGATGTCTCTATCTCATGGCTTCTATCCTCATATTGTCAAGCAACATCGTCCTGCAGGCTTTTGCTCTTGGAGATTTTCCTGCACCCATGTCCTTGAGCGCAATAACGTCCTTGCTTGGGGCTTTCATGACTGCAATTGTTCAGTTAGTTGAAGATCACGAAGTGAAAACTGGTTGGCCACTTGTGAGTTTTAAGGACCTAATTGGCTATTCTTTTCTGGGAGGTGCAGTGAGTGGAATATGCCTAAGCTTCAGTGGGTGGGCAATTGAGAAGAGAGGGCCAGTCTTTGTCTCCATGTTTAGCCCCATTGGTACAGTCTCCACCGTCATTTACTCAGTTGTTACCCTTGGAGATTCTATTAATTTTGGAAGCATTGCAGGTATGTTCCTCATGTTCACTGGGCTATACTTGGTTCTCTGGGCCAAAGGGAAAGAAGTCTATGCAGATGGACATGAATTAGAGAGTGAGTTTGATGCAGAAAAGCCTCTTTTATGTTGA 1065 0.4225 MEDKINKRVMEDVAVIGGLIGVQFIYAGNAVLMGYVMSLGLTSFTIIIFTSLAAFFILFPVAFCVERRKWPKNWSFKLIMQLLFLSFGGLAFQTLLLKGINLASPAMATAMPNLAPGLIFIIAWTFGLEKVNLSNKNSKVKILGTLLCVMGALIMSIMQSISTPATEKEVKIQLSSTPSDSIFDMQKIIGCLYLMASILILSSNIVLQAFALGDFPAPMSLSAITSLLGAFMTAIVQLVEDHEVKTGWPLVSFKDLIGYSFLGGAVSGICLSFSGWAIEKRGPVFVSMFSPIGTVSTVIYSVVTLGDSINFGSIAGMFLMFTGLYLVLWAKGKEVYADGHELESEFDAEKPLLC 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2820g00041 354 Pfam EamA-like transporter family 19 156 IPR000620 GO:0016020
Gabi2820g00041 354 Pfam EamA-like transporter family 189 328 IPR000620 GO:0016020
Gabi2820g00041 354 PANTHER WAT1-RELATED PROTEIN 17 335 IPR030184 GO:0016020|GO:0022857
Gabi2820g00041 354 SUPERFAMILY Multidrug resistance efflux transporter EmrE 252 332 - -
Gabi2820g00041 354 SUPERFAMILY Multidrug resistance efflux transporter EmrE 52 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2820g00041 Gabi-Chr2820 367362 369978 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2820g00041 1 345 Nodulin-like Gene Family AT5G47470 54.179 1.75e-131 379
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2820g00041 - - aprc:113870214 505.753