Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2819g00020 ATGGAAGAAAGCCATGGCTCCCAATGTTCCAAGACAAGTTCATCTAACATTGATGAAGATGAGTGTGAAAGCAAGGTCGATGAAGATGAAAGTAAGCAAAACAACATGGGAGGAAGCTCAAGCAATAGCACAGTGGAAGAGAATGATAAGAAGATAAGGCCTTATGTTAGATCTAAGTTCCCAAGGCTAAGATGGACACCTGATCTTCATCATCGCTTTGTTCATGCTGTTCAAAGACTTGGAGGACATGAGAGAGCAACACCAAAGTTGGTCCTTCAATTGATGAATATCAAAGGTTTAAGCATTGCCCATGTCAAGAGTCATTTACAGATGTTTAGGAGCAAAAAGGTAGATGACCCAAATCAAGTATTGGCCGATCCTAGGAATCTTGTAGAAACTGGAGACAGAAATATTTACAATCTCAGCCAACTTCCAATGCTTCAAGGATATAATCCAAGCCAAAGATATAGATTCGGGGATGCATCTTTTGGTGTCCGTGGAAGAATGGTGCATAGACCTTTTGATTGGTCTAACGGAAATTTTCGGATGGGATCTACCATTTTTGGTGAACAATCAACAAGTAAAATCCATGAACCAAAAAATGAGTTTTTCTCATTTGGTGGACATGAATCTTTATACACAGGCACAAGATTGAGCCATGTTGATTTCACTTCTTCAATCAATGTGAAACTAAGTGCACAAGACCTTGTGCCTATTGATAAGGCCAACAAGGCTTTATATCCCGCGTGTGATAGGTCCAGATCACCTATCAACTCAACAGAAAATCCAATAAAGACACTGAAAAGGAAGGCTTCAGATACTACAATTGATTTGGATCTGTCACTAAAATTAAATTCAAAGATAGATAGTGAAGGAAGCTTGGAGGATCATGAAGTTGATAGTAATTTATCACTCTCATTGTACTCTCAATCCTACTCCTCTATTAATCTTAGCAGCAGGTTGAAGGAAGCACAGGATCGTTGTAAGGAGCAAAGGAAAATTGCCAATATTCTGGATCTGACTATATGA 1029 0.3897 MEESHGSQCSKTSSSNIDEDECESKVDEDESKQNNMGGSSSNSTVEENDKKIRPYVRSKFPRLRWTPDLHHRFVHAVQRLGGHERATPKLVLQLMNIKGLSIAHVKSHLQMFRSKKVDDPNQVLADPRNLVETGDRNIYNLSQLPMLQGYNPSQRYRFGDASFGVRGRMVHRPFDWSNGNFRMGSTIFGEQSTSKIHEPKNEFFSFGGHESLYTGTRLSHVDFTSSINVKLSAQDLVPIDKANKALYPACDRSRSPINSTENPIKTLKRKASDTTIDLDLSLKLNSKIDSEGSLEDHEVDSNLSLSLYSQSYSSINLSSRLKEAQDRCKEQRKIANILDLTI 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2819g00020 342 MobiDBLite consensus disorder prediction 1 53 - -
Gabi2819g00020 342 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 57 117 IPR017930 -
Gabi2819g00020 342 FunFam Myb family transcription factor 59 117 - -
Gabi2819g00020 342 Pfam Myb-like DNA-binding domain 63 111 IPR001005 -
Gabi2819g00020 342 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 30 137 IPR044847 GO:0000976|GO:0006355|GO:0010158
Gabi2819g00020 342 SUPERFAMILY Homeodomain-like 61 115 IPR009057 -
Gabi2819g00020 342 NCBIfam myb-like DNA-binding domain, SHAQKYF class 61 116 IPR006447 GO:0003677
Gabi2819g00020 342 Gene3D - 61 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2819g00020 Gabi-Chr2819 275368 277189 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2819g00020 52 118 G2-like Transcription Factor Family AT2G42660 76.119 5.49e-31 116
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Gabi2819g00020 Myb_DNA-binding 7.3e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2819g00020 - - gmx:102660246 414.846