Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2819g00010 ATGTTTGTCATTCCTTTCGCATCTGAACCTCTCCTTCAGTCATCTGCTTGTCGAAGATCCCAACAGTTATTGCAGGCGTTGCCCATGTTCACTTTCGCAAACCAGGCAGGGCTTTACATGCTGGAGACTACCTTAGTTGCTCTACAAGACATAAAGTTAGAGAAAATATTTGACGATCATGGAAGACTTGGATTTCTTGTTTCATATGTTTTTCCTTGCTCGGTGCTGCAAGCTTCTAGAGGAGAACTCGTTCTGGGGGAGGACTGCCGATTTCTTTTACATGCTCTTATTTGGTGCCACTGTATTGACTGGAATTTTCTTCTTGGGGGGATGATATATGATGGTTTATGTGTGGAGCAAACGAAATCCCTTTATTCATATGAGCTTCCTTGGCCTCTTTACTTTCACTGCTGCCTACCTTCCATGGCTTTCAGGGAAGTTCAACCTTGA 450 0.4356 MFVIPFASEPLLQSSACRRSQQLLQALPMFTFANQAGLYMLETTLVALQDIKLEKIFDDHGRLGFLVSYVFPCSVLQASRGELVLGEDCRFLLHALIWCHCIDWNFLLGGMIYDGLCVEQTKSLYSYELPWPLYFHCCLPSMAFREVQP 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2819g00010 149 Coils Coil 148 149 - -
Gabi2819g00010 149 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 24 63 IPR044830 GO:0003700
Gabi2819g00010 149 Pfam MEKHLA domain 24 60 IPR013978 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2819g00010 Gabi-Chr2819 145124 163155 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2819g00010 24 62 Homeobox Transcription Factor Family AT1G52150 84.615 9.18e-16 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2819g00010 K09338 - nnu:104592078 74.3294