Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi280g00006 ATGAAGACTTTCTCCTCAATTCAACCACCCCAACACTTCCCTTCCACAAGATTTCACTCTTTCACTATCTCAAGGACTCAACTTCATTTTCCTGCAAAGGTCTTCTTTTGCCAAGCAAAATCTGGCATAGATGGGTCTTTGAACTTAAAAGTGATGGCTACCACTGTGTTAGCAGCAGAAAAGGAAGAAGCCAAGGCTGTATTGACCTTGTATTTAAAGGAACGTGGTTTGAGCAATGCAGTTGCAGCAAGAACCATCAATAAGTCAGATCTTTTTATTGATCACCTTGTGTCAAAGCTTCACTCTAAGCACAAATCTCGGTACCTCACAGGGAGAGAGCTTACAACACTTGAGATCAGGGATGCTCTTATGTCTTATCTTGAATCCCTTTTTGAAGAGCATGGAGAAATCCTAGTAGATATAGTGGAAAACTTTCCAAACCCACCTGTTAAGGAAAAATCACATGTGCCAATGCCAATTCCTCCTCCTAGTCCATCAGTAGACTCTAAGAAGCTTAAAGCTGTGTCTCGATTGAGTGAGATAGACCCAGCTGCTGGCAAGCTTCGCCCTCATATTGTGTATCTCATGGAGCTTGGTATGGATATCGAGCAGATTAGGAGTATCATACGGCGATTCCCATCTTTTGCCTATTGTAGTTTGGAGGGTAAAATTAAGCCATTAGTTGAGTTTTTTCTTGAACTTGGAATTCCAGAAGAAAACATTCCGATCATCCTTACTAAAAGGCCTCAATTATGTGGAATAAGTCTATCTGAAAACCTTAAACCCACCATGAAGTTCTTAGAATCTTTGGGTGTTGACAAGGAACAATGGGCTAAGGTGATCTACCGCTTCCCAGCATTGCTAACTTATAGCAGGCAGAAGCTGAGGGAAAGTGTAAATTTTCTCCATGAAATGGGGCTCTCAGAAGAGAACATAGGTAAGGTTTTAACTCGCTGCCCCACTATTATTAGTTACAGTGTAGAAGACAATCTCAGACCAACAGCTAAGTACTTCAGTTCTTTAGGGGTTGATGTTGGCATTCTTCTATTCAGGTGCCCACAGACTTTTGGTCTTAGCATTGAGGCTCATCTAAAGCCTGTAACAGAATTTTTCTTGGAGAGGGGATACAGTTTGGAAGAAATTCGGACCATGATTTCAAGATATGGAGCCTTGTACAGTTTTAGCTTGACTGAGAATTTGATTCTGAAATGGGATTTCTTTTTGACCATGGATTACCCAAAGTCTGAGCTGGTTAAATTCCCTCAATTTTTTGGATACAATTTAGAAAAAAGGATCAAACCAAGATATGCAGTTATGAAAGAATCTGGAGTGATGTTACTGCTTAACCAGGTTCTATCACTGTCAAGCAGCGACTTTGAAAAGGCCTTGGAAAAGAAAATTAAGAAAATGCAAGGTGGTCGCTCAATCATATTTAGAAATGAAAACTGA 1449 0.403 MKTFSSIQPPQHFPSTRFHSFTISRTQLHFPAKVFFCQAKSGIDGSLNLKVMATTVLAAEKEEAKAVLTLYLKERGLSNAVAARTINKSDLFIDHLVSKLHSKHKSRYLTGRELTTLEIRDALMSYLESLFEEHGEILVDIVENFPNPPVKEKSHVPMPIPPPSPSVDSKKLKAVSRLSEIDPAAGKLRPHIVYLMELGMDIEQIRSIIRRFPSFAYCSLEGKIKPLVEFFLELGIPEENIPIILTKRPQLCGISLSENLKPTMKFLESLGVDKEQWAKVIYRFPALLTYSRQKLRESVNFLHEMGLSEENIGKVLTRCPTIISYSVEDNLRPTAKYFSSLGVDVGILLFRCPQTFGLSIEAHLKPVTEFFLERGYSLEEIRTMISRYGALYSFSLTENLILKWDFFLTMDYPKSELVKFPQFFGYNLEKRIKPRYAVMKESGVMLLLNQVLSLSSSDFEKALEKKIKKMQGGRSIIFRNEN 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi280g00006 482 SMART mt_12 346 377 IPR003690 GO:0003690|GO:0006355
Gabi280g00006 482 SMART mt_12 382 413 IPR003690 GO:0003690|GO:0006355
Gabi280g00006 482 SMART mt_12 278 308 IPR003690 GO:0003690|GO:0006355
Gabi280g00006 482 SMART mt_12 242 273 IPR003690 GO:0003690|GO:0006355
Gabi280g00006 482 SMART mt_12 313 344 IPR003690 GO:0003690|GO:0006355
Gabi280g00006 482 SMART mt_12 206 237 IPR003690 GO:0003690|GO:0006355
Gabi280g00006 482 SMART mt_12 414 445 IPR003690 GO:0003690|GO:0006355
Gabi280g00006 482 SMART mt_12 169 201 IPR003690 GO:0003690|GO:0006355
Gabi280g00006 482 Pfam mTERF 187 297 IPR003690 GO:0003690|GO:0006355
Gabi280g00006 482 Pfam mTERF 294 460 IPR003690 GO:0003690|GO:0006355
Gabi280g00006 482 Pfam mTERF 194 373 IPR003690 GO:0003690|GO:0006355
Gabi280g00006 482 PANTHER CGI-12 PROTEIN-RELATED 155 464 IPR003690 GO:0003690|GO:0006355
Gabi280g00006 482 Gene3D Transcription termination factor 3, mitochondrial 249 468 IPR038538 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Gabi280g00006 mTERF 1.5e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi280g00006 K15031 - gmx:100781900 733.406