Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2809g00039 ATGGGTTCCAAGATGGAAGGAGCTTCTACCCCAGCAATTCGGCGTGATCCATATGAGGTTCTTTCTGTGTCAAGAGACTCCACTGATCAGGAAATCAAAACGGCCTACAGAAAACTTGCTCTAAAGTATCACCCTGACAAGAATGCCAACAATCCTGAAGCTTCAGAACTATTTAAAGAGGTTGCATATTCTTATAGTATTTTGTCTGATCCAGAGAAGAGACGGCAGTATGACAGTGCAGGATTTGAGGCACTTGATGCTGATGGCCTGGACATGGAAATTGATTTATCTAATCTTGGAACTGTCAATACAATGTTTGCAGCTTTATTCAGCAAGCTGGGTGTCCCTATCAAGACCACCATTTCAGCTAACGTTCTTGAAGAAGCTCTGAATGGAACAGTGACAGTCAGACCCCTTCCAATTGGGTCATCTGTTAGTGGAAAGGTAGAAAAGCAATGTGCTCATTTTTTTGGTGTCACAATAAATGAGCAGCAAGCTGAGTCAGGGATTGTAATAAGAGTTACTTCAACTGTGCAAAGCAAATTCAAGTTGCTGTACTTTGAACAAGATGCAAATGGTGGTTATGGTTTGGCAGTGCAGGAAGATAGTGAGAAGGCTGGCAAGGTGACATGTGCTGGGATGTATTTCTTACATTTTCAAGTTTACAGAATGGATTCGACTGTGAATGCGTTAGCAATGGCCAAGGATCCTGAAGCTTCTTTCTTTAAAAAGTTGGAAGGTCTTCAACCTTGTGAAGTCTCGGAACTAAAGCCTGGCACTCACATATTTGCTGTTTATGGAGATAACTTCTTTAAGACCGCTTCCTATACAATCGAGGCAGTTTGTGCAAAATCATATGAAGATACCTCTCAAAAACTTAAGGATATTGAGGCTCAAATTTTAAGAAAGAGGATTGAGCTACGCCAATTTGAAGCAGAATATAGACAGGCATTAGCGCGTTATCAAGAAGTTACTGACAAATACACCCAAGAAAAGCAGTCTGTAGACGAACTTCTGAAACAAAGGGACACTATCCATTCTTCTTTCACCATTGTCAAGTCAACCAATATTAGTGTGAGTGGTAGTAACTTAAGCAATGGAAGTACTAGCAAAATTGCTGGCGAAGATTCCAAAGTAGAGAGCTCTGGAGAAGATGGTGGGTCTGATGCAAAGGATAAATCAGGCAAAAAGAAATGGTTTAACCTCAATCTTAAGGGTTCTGATAAGAAGTTGGGTTAA 1239 0.4076 MGSKMEGASTPAIRRDPYEVLSVSRDSTDQEIKTAYRKLALKYHPDKNANNPEASELFKEVAYSYSILSDPEKRRQYDSAGFEALDADGLDMEIDLSNLGTVNTMFAALFSKLGVPIKTTISANVLEEALNGTVTVRPLPIGSSVSGKVEKQCAHFFGVTINEQQAESGIVIRVTSTVQSKFKLLYFEQDANGGYGLAVQEDSEKAGKVTCAGMYFLHFQVYRMDSTVNALAMAKDPEASFFKKLEGLQPCEVSELKPGTHIFAVYGDNFFKTASYTIEAVCAKSYEDTSQKLKDIEAQILRKRIELRQFEAEYRQALARYQEVTDKYTQEKQSVDELLKQRDTIHSSFTIVKSTNISVSGSNLSNGSTSKIAGEDSKVESSGEDGGSDAKDKSGKKKWFNLNLKGSDKKLG 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2809g00039 412 FunFam Chaperone protein dnaJ 16 1 98 - -
Gabi2809g00039 412 PRINTS DnaJ domain signature 73 92 IPR001623 -
Gabi2809g00039 412 PRINTS DnaJ domain signature 53 73 IPR001623 -
Gabi2809g00039 412 PRINTS DnaJ domain signature 18 36 IPR001623 -
Gabi2809g00039 412 PRINTS DnaJ domain signature 36 51 IPR001623 -
Gabi2809g00039 412 ProSiteProfiles dnaJ domain profile. 16 81 IPR001623 -
Gabi2809g00039 412 MobiDBLite consensus disorder prediction 364 395 - -
Gabi2809g00039 412 ProSitePatterns Nt-dnaJ domain signature. 58 77 IPR018253 -
Gabi2809g00039 412 Gene3D DnaJ domain 2 93 IPR036869 -
Gabi2809g00039 412 Pfam DnaJ domain 16 78 IPR001623 -
Gabi2809g00039 412 CDD DnaJ 16 70 IPR001623 -
Gabi2809g00039 412 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN) 3 410 - -
Gabi2809g00039 412 Coils Coil 286 341 - -
Gabi2809g00039 412 SUPERFAMILY Chaperone J-domain 15 88 IPR036869 -
Gabi2809g00039 412 SMART dnaj_3 15 73 IPR001623 -
Gabi2809g00039 412 MobiDBLite consensus disorder prediction 377 395 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2809g00039 Gabi-Chr2809 303048 313450 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2809g00039 7 88 C2H2 Transcription Factor Family AT1G74250 40.230 1.43e-12 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2809g00039 - - gmx:100811270 723.005