Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2809g00034 ATGATGGTTCCAGCAAATGTGTTTTGCATCCTCTTTTTCTCTACCCTTTTGCTTCTTGTCTTCCCAGCAAATGGAAAGTGTCCATCTTCGCTTGATTGTGGGAACCTTGGCAAAATCCATTTCCCTTTCACTGATTTGAAGCACCCTGAATGTGGCTTATTGGTGATACATGGTTGTGATGACCCTTCCCCGGACGCTGTTAAAACCATTAAGAACAAAGCAACATGGTTTTATGTTGAAAAAATTGACCAGTTTACCATTGTCATCAGAGATAACGATCTCCAAACTCTCTTGTTGTCCAGAAGATGTGGGGTCTTCAGTGAAAACTCTACTTTTGACTCTTCTTCTCCTTTCTTTTCTTTTCAATTCTTGAATGTTACTTTGTTCACATGCAACAGTACCCTCAATGTTACCCTTCCTCCATCCTTTTCAAAATCTACACTATGCCGTGGTGATGATATCTTCTATGATACAGATACTATGGAGGATGAGTTTGTCAGTTCCGAAAACTATTATCGGTATTTTACAGCATGTTCAATGGTTCGGCTTCCAATCAGAGATGCAGGTCTCATCCCTGATCCCAAAGGAAACCCCTTTGATTTTGTATCAGCTGAGTTTCCTATCCAAATACAGATATCTCCTGCTTGTTCTTCTTGTTACTATCTCAGAAGAGGCCAGTGTCAACTTGATAACCAAGGCAACTTCTTTTGTGCACAAGATAAAACTAGTAAAAAAGTGAAGATATTGGTAGCAGCTGCTTCAGTTGCTGGAGCACTAGGAATTTTGATGGTCATGGCTTGCATCTTTCGAAGATATTATTGTTATAAGGAAAATCCCACCTTGCAAATGATTGAGACTTTTCTGAAGCAACATGGACACCTTTCAGCCAAAAGGTACAGTTATTTGGATGTAAAGAAAATGACCAATTCATTCAAAAACAAACTTGGCCAAGGAGGATTCGGTACTGTATACAAAGGGAGGTTACACAATGGAAGTCTTGTGGCAGTGAAGGTTTTAAGTAAATTACAAGGTGACGGAGAAGAATTCATTAATGAAGTTGCTAGTATTAGCATGACTTCTCATATTAACATTGTCAGTTTACTGGGATTTTGTTTGGAAGGCACCAAAAGAGTTCTCATATATGAGTATATGCCTCATGGATCTCTTGAAAAGTTCATATATGAAGAGAAAGATCCTTTAAAGCTCAATCTAACATTGAATTGCAAAACTATGTACAATATTGCAATTGGTGTTGCTCGAGGATTGGAGTATTTGCACAAGGGGTGCAACACTAAAATCTTGCATTTTGACATAAAACCTCACAACATACTCTTAGATGAGTTCTTTTGCCCAAAGATATCAGATTTTGGGCTAGCTAAAATATGTCCAAGAGAAAAAAGTACTGTATCAATGATGGTTGCAAGGGGAACTGCAGGGTATATTGCTCCTGAGGTGTTCTGCAGAAATTTTGGTGGGGTGTCACATAAATCAGATGTGTATAGTTATGGAATGATGGTCTTGGAAATGCTTGGTGCAAGAGAGAATATCAATGACAAAGCTGATTTTTCAAGTGAAAAGTACTTTCCACATTGGGTTTACAGCCATCTTGAATTGAATGAAGAGCTTCAATTGCGAAGTATAAAAAGCCAAAGTGATAAAGAAATGGTGAGAAAAATGACAATAGTGAGTTTGTGGTGCATACAGACTGACCCTTCCAATAGACCCGCAATGAGTAAAGTGGTGGAAATGATGGAAGGAAGCATTAGCTCATTGCAAATACCACCCAAACCTTTTGTTTCTTCAATTTCCGCGTCTTCATCCCTTGATTCTCAAACAAGTGAGACGTCATAG 1851 0.3857 MMVPANVFCILFFSTLLLLVFPANGKCPSSLDCGNLGKIHFPFTDLKHPECGLLVIHGCDDPSPDAVKTIKNKATWFYVEKIDQFTIVIRDNDLQTLLLSRRCGVFSENSTFDSSSPFFSFQFLNVTLFTCNSTLNVTLPPSFSKSTLCRGDDIFYDTDTMEDEFVSSENYYRYFTACSMVRLPIRDAGLIPDPKGNPFDFVSAEFPIQIQISPACSSCYYLRRGQCQLDNQGNFFCAQDKTSKKVKILVAAASVAGALGILMVMACIFRRYYCYKENPTLQMIETFLKQHGHLSAKRYSYLDVKKMTNSFKNKLGQGGFGTVYKGRLHNGSLVAVKVLSKLQGDGEEFINEVASISMTSHINIVSLLGFCLEGTKRVLIYEYMPHGSLEKFIYEEKDPLKLNLTLNCKTMYNIAIGVARGLEYLHKGCNTKILHFDIKPHNILLDEFFCPKISDFGLAKICPREKSTVSMMVARGTAGYIAPEVFCRNFGGVSHKSDVYSYGMMVLEMLGARENINDKADFSSEKYFPHWVYSHLELNEELQLRSIKSQSDKEMVRKMTIVSLWCIQTDPSNRPAMSKVVEMMEGSISSLQIPPKPFVSSISASSSLDSQTSETS 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2809g00034 616 SUPERFAMILY Protein kinase-like (PK-like) 291 584 IPR011009 -
Gabi2809g00034 616 Pfam Protein kinase domain 312 582 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2809g00034 616 FunFam serine/threonine-protein kinase PBS1-like 281 383 - -
Gabi2809g00034 616 FunFam PR5-like receptor kinase 384 596 - -
Gabi2809g00034 616 PANTHER RUST RESISTANCE KINASE LR10-RELATED 281 605 IPR045874 GO:0004672
Gabi2809g00034 616 SMART serkin_6 309 584 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2809g00034 616 Gene3D Phosphorylase Kinase; domain 1 284 383 - -
Gabi2809g00034 616 ProSitePatterns Protein kinases ATP-binding region signature. 315 337 IPR017441 GO:0005524
Gabi2809g00034 616 Gene3D Transferase(Phosphotransferase) domain 1 384 593 - -
Gabi2809g00034 616 ProSiteProfiles Protein kinase domain profile. 309 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2809g00034 616 ProSitePatterns Serine/Threonine protein kinases active-site signature. 433 445 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2809g00034 Gabi-Chr2809 276512 279232 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2809g00034 244 616 Receptor kinase-like Gene Family AT4G18250 51.832 5.61e-125 382
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Gabi2809g00034 Pkinase 1.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2809g00034 - - gmx:100807312 912.909