Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2809g00033 ATGGCCTCTCATGAAGGGAGGCGGCGTCATCACGATCTTGTACCTCTTGCTGTATTGCTTACCAGAGAGATGAAGAATGAGAAGATGGAGAAGCCCACTGTGAGATACGGGTCTGCTGCTCAGTCTAAAAAAGGGGAGGATTACTTTCTAATTAAGACTGATTGTCAGCGAGTTCCTGGGAATTCTTCATCATCATTTTCTGTATTCGCGATCTTTGACGGGCACAATGGAAATGCTGCAGCCATTTATAGTAGGGAGCATTTGTTAAATCATGTGTTGGGTGCTCTCCCTCGAGGTATTGGACGAGAGGAGTGGCTGCAAGCTTTACCTCGGGCATTGGTTGCTGGGTTTGTGAAGACTGACAAGGAATTTCAGAGAAGAGGAGAAACTTCTGGAACCACTGCCACGTTTGTGATAGTGGATAGGTGGACTGTGACAGTTGCGTCTGTTGGAGATTCCCGTTGTATACTAGATGCACAAGGTGGTGCTGTTACCAACTTAACTGTTGATCACAGACTTGAGGAAAATATAGAAGAGAGGGAACGTGTTACAGCAAGTGGAGGTGAAGTTGGGAGGCTTAGCATTGTTGGTGGTGCTGAGATTGGTCCCCTTCGTTGCTGGCCTGGTGGTCTATGCCTTTCTAGGTCAATAGGAGACATGGATGTTGGGGAGTTTATAGTTCCAATACCATATGTTAAACAAGTGAAGCTATCAAAGGCTGGTGGGAGGCTTATAATTTCTTCTGATGGCATCTGGGATGCTCTGTCGTCAGAAATGGCTGCAAAATCTTGTCATGGTTTGCCTGCTGAACTTGCTGCGAAGCAGGTTGTGAAGGAAGCACTAAGGACAAGGGGGTTAAAGGATGATACAACTTGTATAGTAGTTGACATAATTCCACCTGATAATGGATTGCCGCCGCCACCTCCCCCCAAGAAGCAGAACAAGTTGAGGGCTCTTTTGTTCAGGAAGAGGTCCCATGATTCTGCTGGTAAGCTGTCAAAAAAGCTTTCGGCTATAAATATAGTGGAGGAACTGTTTGAAGAAGGATCAGCAATGCTTGCTGAAAGATTAGGAAATGATGTCAACTCGGGGCAATCAACATCTGGCATATTCATGTGTGCTGTATGCCAGGTTGACCTTGCTTTAAGTGAGGGCATCTCGGTCCATGCAGGTTCCATTTTCTCCACCAGCTCGAAGCCCTGGCAAGGTCCTTTTCTATGTGCTGATTGTCGCAATAAGAAGGATGCTATGGAAGGAAAACGTCCTAGTGGAGTTAAAGTGTCATAG 1287 0.4615 MASHEGRRRHHDLVPLAVLLTREMKNEKMEKPTVRYGSAAQSKKGEDYFLIKTDCQRVPGNSSSSFSVFAIFDGHNGNAAAIYSREHLLNHVLGALPRGIGREEWLQALPRALVAGFVKTDKEFQRRGETSGTTATFVIVDRWTVTVASVGDSRCILDAQGGAVTNLTVDHRLEENIEERERVTASGGEVGRLSIVGGAEIGPLRCWPGGLCLSRSIGDMDVGEFIVPIPYVKQVKLSKAGGRLIISSDGIWDALSSEMAAKSCHGLPAELAAKQVVKEALRTRGLKDDTTCIVVDIIPPDNGLPPPPPPKKQNKLRALLFRKRSHDSAGKLSKKLSAINIVEELFEEGSAMLAERLGNDVNSGQSTSGIFMCAVCQVDLALSEGISVHAGSIFSTSSKPWQGPFLCADCRNKKDAMEGKRPSGVKVS 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2809g00033 428 SMART PP2C_4 25 295 IPR001932 -
Gabi2809g00033 428 SUPERFAMILY PP2C-like 41 297 IPR036457 -
Gabi2809g00033 428 Pfam Protein phosphatase 2C 61 282 IPR001932 -
Gabi2809g00033 428 ProSiteProfiles PPM-type phosphatase domain profile. 28 297 IPR001932 -
Gabi2809g00033 428 FunFam probable protein phosphatase 2C 5 35 302 - -
Gabi2809g00033 428 CDD PP2Cc 43 297 IPR001932 -
Gabi2809g00033 428 SMART PP2C_SIG_2 51 297 IPR001932 -
Gabi2809g00033 428 Gene3D - 33 301 IPR036457 -
Gabi2809g00033 428 PANTHER PROTEIN PHOSPHATASE 36 296 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2809g00033 Gabi-Chr2809 265187 269589 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2809g00033 1 427 PP2C-type Phosphatase Gene Family AT1G68410 78.440 0.0 689
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2809g00033 - - gmx:100779571 759.985