Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2809g00030 ATGCCCTTTGGATGTGATCAAGACAAGGCTACAAGTTCATGGCCTTCCTCCTGCGCAGAAAGTATCATTGTCTCGAGCTTGAAGAATATAGTAAGGACTGAAGGCTTCAGGGGAATGTACCGTGGCCTTTCACCAACAATACTGGCATTACTTCCAAACTGGGCAGTTTACTTCACAGTCTATGAGCAATTAAAGGGCCTGCTTCGTTCACATGCAGATGGTTGCAACGAACTCTCAACTATTGGAAATATTATAGCTGCTGCCGGTGCTGGGGCGGCAACTGCAATTTCTACAAATCCACTGTGGGTTGTTAAGACAAGACTCCAAACTCAAGGAATGAGGCCTGATGTTGTTCCTTACAAAAGTGTTCTTTCTGCTTTGACAAGGATTTCACGCGAGGAAGGCATGCGAGGACTATATAGTGGCATCGTGCCTTCCTTGGCTGGCGTAAGCCATGTTGCGATTCAATTCCCTGCATACGAAAAGATCAAGTCATACATGGCAGAAAAAGATAAAACAACTGTTGACAAGCTAAGTCCTGGGAGTGTGGCAATTTCATCATCAATTTCAAAAGTAATTGCCTCAGTAATGACTTATCCGCATGAGGTGATACGTTCGAGGCTGCAAGAACAAGGCCATGCCAAAAGTAATGGGACACGATATGCAGGGGTAGTTGATTGTACTAGGAAGGTGTTTCAAAAGGAAGGCATTGCAGGGTTTTATCGTGGTTGTGCAACCAATCTTTTAAGAACAACTCCGTCTGCTGTTATTACGTTCACCAGTTATGAGATGATACACAGGTTTTTGCGGCGGGTTATACCTCAGCCTAAGGACAAGGGGTATCCGCAAGGCCCTTCTAAATCCAATGAACTTAACAAGCCCAAACCAGAAGCTAGTGACATTAATATTAGAAATGGCACTGATTCGGGGCAATCACCATCTCAGTCTAACAAGAAAGCTTCATCAATTCCTCTTGGAAACAAAGAGCAGCTAACAAGACATTGA 1005 0.4418 MPFGCDQDKATSSWPSSCAESIIVSSLKNIVRTEGFRGMYRGLSPTILALLPNWAVYFTVYEQLKGLLRSHADGCNELSTIGNIIAAAGAGAATAISTNPLWVVKTRLQTQGMRPDVVPYKSVLSALTRISREEGMRGLYSGIVPSLAGVSHVAIQFPAYEKIKSYMAEKDKTTVDKLSPGSVAISSSISKVIASVMTYPHEVIRSRLQEQGHAKSNGTRYAGVVDCTRKVFQKEGIAGFYRGCATNLLRTTPSAVITFTSYEMIHRFLRRVIPQPKDKGYPQGPSKSNELNKPKPEASDINIRNGTDSGQSPSQSNKKASSIPLGNKEQLTRH 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2809g00030 334 SUPERFAMILY Mitochondrial carrier 24 264 IPR023395 -
Gabi2809g00030 334 Gene3D Mitochondrial carrier domain 7 272 IPR023395 -
Gabi2809g00030 334 FunFam Nicotinamide adenine dinucleotide transporter 2, mitochondrial 6 269 - -
Gabi2809g00030 334 MobiDBLite consensus disorder prediction 275 334 - -
Gabi2809g00030 334 ProSiteProfiles Solute carrier (Solcar) repeat profile. 78 166 IPR018108 -
Gabi2809g00030 334 ProSiteProfiles Solute carrier (Solcar) repeat profile. 178 268 IPR018108 -
Gabi2809g00030 334 Pfam Mitochondrial carrier protein 179 270 IPR018108 -
Gabi2809g00030 334 Pfam Mitochondrial carrier protein 17 70 IPR018108 -
Gabi2809g00030 334 Pfam Mitochondrial carrier protein 77 169 IPR018108 -
Gabi2809g00030 334 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 21 274 IPR044712 GO:0006862|GO:0055085
Gabi2809g00030 334 ProSiteProfiles Solute carrier (Solcar) repeat profile. 1 67 IPR018108 -
Gabi2809g00030 334 MobiDBLite consensus disorder prediction 302 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2809g00030 Gabi-Chr2809 236533 241390 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2809g00030 22 328 Chloroplast and Mitochondria Gene Families AT1G25380 63.666 1.19e-130 375
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2809g00030 K15115 - gmx:100797064 494.197