Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2809g00020 ATGGTTTCGAGGTCATATTCGAACTTGTTAGATCTTACTTCCTGTGACTCCCCAACTTTCGGTCGTGAAAAGAAAAGGCTTCCTCGGGTGGCCACTATTGCTGGAGTACTGTCTGAACTAGATGATGATAACAGCAACAGTGTTGGTTCTGGTGCTCCCTCTTCCATCTCTCAAGATAGGATGATCATTGTAGGTAACCAACTTCCGTTACGGGCACACAGGAAAGATAATGGTAAGTGGGACTTCACCTGGGATGAGGACTCACTTCTTTTACAGCTGAAAGATGGTCTTGGGGAGGATGTAGAAGTTATCTATGTTGGTTGTCTCAGAGAAGAAATTGAGCCAAGTGAGCAAGATGATGTTGCTCAACACTTGCTCGACTCTTTCAAATGTGTACCCACATTCCTCCCTCCTGAGCTTTTTAGTAAATTCTATCATGGATTCTGCAAACAACATCTATGGCCTTTATTTCACTACATGCTTCCACTATCACCTGATCTTGGTGGTCGATTTGATAGGTCCCTTTGGCAAGCTTATGTTTCTGTGAACAAGATATTTGCAGACAAAGTGATGGAAGTCATTAGCCCTGATGATGACTTTGTTTGGGTTCATGACTACCATTTGATGGTTCTGCCAACATTTTTGAGAAAGAGATTTAACAGGGTGAGGCTAGGATTCTTCCTCCATAGTCCATTTCCTTCCTCGGAGATATATAGAACCCTTCCTGTTAGGGATGAACTTCTCAGAGCTCTTTTGAACTCTGACCTTATTGGGTTTCATACTTTTGATTATGCCAGGCACTTCCTCTCCTGTTGTAGTAGAATGCTTGGGCTTTCTTATCAGTCCCAGCGTGGCTACATCGGTATCGAGTACTATGGTAGAACTGTTAGTATTAAGATTCTTCCTGTAGGTATTCATATAGTCCAGCTTCAATCTGTCATGAATCTTCCTGAGACAGAAAGAAAAGTTGCTGAGTTACAAGACCAGTTCAAAGGTCAAACTGTGATGCTTGGGGTTGATGACATGGATATCTTTAAAGGAATCAGCTTAAAACTTTTGGCCTTGGAACAATTGCTTTTGCAACATGCTGATAAGAGGGGCAAAGTTGTTCTGGTCCAAATTGCAAACCCTGCTAGAGGCCGGGGGAAGGATGTACAGGAGGTACAAAGCGAAACTTATGCCACAGTGAAAAGGATAAATGATACATTTGGAAGGTCCGGATACACACCTGTAATATTGATTGATACACCTCTTCAATCTTATGAGCGAATTGCTTATTACGTGATTGCAGAATGTTGTCTTGTTACAGCAGTGAGAGATGGGATGAACCTTATACCCTATGAATATATCATATGTAGACAAGGAAGTGAGAAGCTAGATGAGATTTTAGGGATAAACCCATTTACTGAAAAAAAGAGCATGCTGGTTGTGTCGGAGTTCGTTGGGTGCTCCCCATCACTAAGTGGGGCAATTCGAGTCAATCCATGGAACATTGATGCTGTTTCTGAAGCCATGGATTCTGCCTTAATGATCCCGGAGTCTGAAAAACAGATGCGGCATGAGAAGCATTATAGGTATGTTAGCACACATGATGTTGCATATTGGGCACGTAGCTTCTTGCAGGATCTGGAAAGGGCATGTAGGGATCATCTCAGGAGGAGATGCTGGGGAATTGGTTTTGGTTTAGGCTTTCGGGTAATCACTTTGGACCCAAATTTTAGGAAGCTATCAGTGGAGCATATTGTTTCAGCTTATAAGAGGACCAAACACCGAGCAATTCTTTTGGATTATGATAGTACCATGATGCAGCCTGGATCAATTAGTACAGCACCTAATGCTGAAGTTATAGGCATCTTGAACAGCTTGTGCAGGGACACCAAGAATGTTGTTTTCATTGTCAGTGGAAAGGAGAAAAAGATTCTTACTGAATGGTTTTCTTCTTGTGATAATTTGGGAATTGCTGCAGAGCACGGTTTTTTTATGAGGACAAATCATGATGCAGAATGGGAAACTTGTGTTGCTGTTCCAGATTTTGACTGGAAACAGATTGCTGAGCCAGTAATGCAGTTATACATGGAAACAACTGATGGTTCTAACATAGAGGCCAAAGAGAGTGCTCTTGTTTGGAATTATGAGTATGCAGATCGAGACTTTGGTTCGTGCCAAGCTAAGGAACTTTTAGATCATCTTGAAAGTGTTCTGGCTAATGAACCTGTTTCTGTTAAAAGTGGTTCACACATTGTGGAAGTTAAACCTCAGGGTGTGGACAAGGGCATTGTAGCAGAACATCTTCTGTTAACAATGCAACAAAAGGGAATGATTCCAGATTTTGTTCTATGCATTGGGGATGACAGATCAGATGAGGACATGTTTAAGGTAATAATGAATGCAAAGGACTCTCTTTCTACTGTTGCAGAAGTGTTTCCTTGCACTGTTGGGCAGAAACCTAGTAAGGCCAAGTATTACTTGGAAGACACAAGTGAGATTTTGAGAATGTTGCATGGCCTTGCCAATGCTTCTGAGCAGTCTCTTAGAAGTTCTCCCCAGTCTTCTAATTAA 2559 0.4185 MVSRSYSNLLDLTSCDSPTFGREKKRLPRVATIAGVLSELDDDNSNSVGSGAPSSISQDRMIIVGNQLPLRAHRKDNGKWDFTWDEDSLLLQLKDGLGEDVEVIYVGCLREEIEPSEQDDVAQHLLDSFKCVPTFLPPELFSKFYHGFCKQHLWPLFHYMLPLSPDLGGRFDRSLWQAYVSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVRLGFFLHSPFPSSEIYRTLPVRDELLRALLNSDLIGFHTFDYARHFLSCCSRMLGLSYQSQRGYIGIEYYGRTVSIKILPVGIHIVQLQSVMNLPETERKVAELQDQFKGQTVMLGVDDMDIFKGISLKLLALEQLLLQHADKRGKVVLVQIANPARGRGKDVQEVQSETYATVKRINDTFGRSGYTPVILIDTPLQSYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGSEKLDEILGINPFTEKKSMLVVSEFVGCSPSLSGAIRVNPWNIDAVSEAMDSALMIPESEKQMRHEKHYRYVSTHDVAYWARSFLQDLERACRDHLRRRCWGIGFGLGFRVITLDPNFRKLSVEHIVSAYKRTKHRAILLDYDSTMMQPGSISTAPNAEVIGILNSLCRDTKNVVFIVSGKEKKILTEWFSSCDNLGIAAEHGFFMRTNHDAEWETCVAVPDFDWKQIAEPVMQLYMETTDGSNIEAKESALVWNYEYADRDFGSCQAKELLDHLESVLANEPVSVKSGSHIVEVKPQGVDKGIVAEHLLLTMQQKGMIPDFVLCIGDDRSDEDMFKVIMNAKDSLSTVAEVFPCTVGQKPSKAKYYLEDTSEILRMLHGLANASEQSLRSSPQSSN 852
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2809g00020 852 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 60 548 - -
Gabi2809g00020 852 CDD HAD_TPP 592 828 - -
Gabi2809g00020 852 NCBIfam HAD-IIB family hydrolase 593 795 IPR006379 -
Gabi2809g00020 852 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 47 838 IPR001830 GO:0003824|GO:0005992
Gabi2809g00020 852 NCBIfam trehalose-phosphatase 589 836 IPR003337 GO:0003824|GO:0005992
Gabi2809g00020 852 CDD GT20_TPS 60 544 IPR001830 GO:0003824|GO:0005992
Gabi2809g00020 852 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 53 311 - -
Gabi2809g00020 852 Gene3D Glycogen Phosphorylase B; 53 312 - -
Gabi2809g00020 852 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 590 707 - -
Gabi2809g00020 852 FunFam Trehalose-6-phosphate synthase 2 674 753 - -
Gabi2809g00020 852 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 720 849 - -
Gabi2809g00020 852 Pfam Glycosyltransferase family 20 60 544 IPR001830 GO:0003824|GO:0005992
Gabi2809g00020 852 FunFam Alpha,alpha-trehalose-phosphate synthase 313 528 - -
Gabi2809g00020 852 Gene3D Glycogen Phosphorylase B; 313 528 - -
Gabi2809g00020 852 Pfam Trehalose-phosphatase 594 827 IPR003337 GO:0003824|GO:0005992
Gabi2809g00020 852 SUPERFAMILY HAD-like 591 837 IPR036412 -
Gabi2809g00020 852 Gene3D - 590 707 IPR023214 -
Gabi2809g00020 852 Gene3D - 716 850 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2809g00020 Gabi-Chr2809 175637 181077 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2809g00020 1 837 Trehalose Biosynthesis Gene Families AT4G17770 78.810 0.0 1424
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2809g00020 K16055 - gmx:100782799 1550.41