Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2809g00019 ATGTTCCAAATGGTTTTGTTGTTGCTTTTTCTTCTGTGCAATTCTCTTGTTGCACCTGTGAGCTCTCTCAACGTTGAAGGCTCTCTGCTTTTGACACTGAAGAGGTCCATCATCGCAGACCCAGAAAGGTCTTTGAGTAACTGGAACTCTTCTGATGAGAATCCATGCTCATGGAATGGGATCGCGTGCAAGGAGCAAAGTGTTGTCTCCATTAGTATCCCAAATAGGAAACTTTCTGGGTTTCTTCCTTCTGCGCTAGGATCTCTTCCCCAGCTCCGCCATGTCAATTTGAGGAACAACAAGCTGTTCGGGAGCTTACCGGCTGAGCTCTTTCAAGCTCAGGGACTGCAAAGTTTGGTGCTTTATGGCAATTCCTTTTCTGGGTCAGTTCCAAATGATATTGGGAAGCTCAGGTACCTTCAAACTCTTGATTTATCACAAAATTTCTTCAATGGGTCTTTACCTGCTGCCATAGTCAAATGCAAGAGGCTCAAAACCGTTGTTCTTAGTCATAACAATTTCACCGGTCCTCTGCCAGATGGATTTGGTGGTGATTTGTCTTCTCTAGAAAAACTAGACCTTTCTTTCAATCAATTCAATGGTTCAATTCCTAGTGATATGGGAAAGCTATCAAGCCTGCAAGGAACTGTTGATTTGTCTCATAATCATTTTAGTGGTTCAATCCCAGGCAGCCTTGGTAATCTACCTGAGAAGGTTTACATTGATCTTACTTACAACAATTTAAGTGGTCCAATACCACAAACTGGTGCTTTAATGAACAGAGGACCAACGGCTTTTATTGGCAATCCTGGCCTATGTGGCCCCCCCTTGAAGAACCTTTGTGCCCCGGATACTCCTGGTCCCAGTTCACCTTCCTCATTTCCATTTTTGCCTGATAATTACCCACCTCCGGATACTGACAATGGTTCTGGGAAAAGTGAGAAAAGCAAAGGGCTAAATAAGGGTGCTGTTATTGGCATTGTTGTGGGAGATATAATTGGAATTTGCCTTTTAGGTTTGCTGTTCTCTTACTGCTACTCAAGGGTTTGTGGTTTTAATCAGGATCAGGATGAAAATGGTTTTGATAAGGGAGGGAGAGTGAGGAAGGAGTGCTTATGCTTCAGAAAAGATGAATCTGAGACCCTATCTGATCATGTTGAGCAACATGATCTTGTTCCATTAGATGCTCAAGTGGCATTTGATTTGGATGAGCTTCTTAAGGCTTCAGCTTTTGTTCTGGGAAAGAGTGGAATAGGGATTGTCTACAAAGTGGTGCTTGAAGACGCGCTTACCTTGGCTGTGAGAAGATTGGGGGAGGGAGGTTCTCAAAGGTTGAAGGAGTTCCAAACAGAAGTTGAAGCAATAGGAAAGTTAAGGCATCCAAATATTGTTACTCTGAGAGCCTATTACTGGTCTGTTGATGAGAAGCTTCTCATCTATGATTATATTCCCAATGGAACCCTTGCCACAGCAATTCATGGGAAAGCTGGACTTGTCACTTTTACACCACTATCTTGGTCTGATCGAATAAAAATCATGAAGGGAATTGCAAAAGGATTGGTCTACCTGCATGAATTTAGCCCCAAAAAATATGTCCATGGAGACTTGAAGCCAAGTAACATACTGCTAGGGCATAGCATGGAACCCCACATTTCTGATTTTGGTCTTGGCCGCCTTGCAAATATTGCTGGAGGGTCTCCAACCTTGCAATCCAACCGAGTGGCTGCAGAGAAACCCCAAGAAAGACAAAAGAGCTTATCAACAGAAGTTACAACTAATATTTTGGGAAATGTTTATCAGGCTCCAGAAACACTGAAGGTGGTGAAGCCATCACAGAAGTGGGATGTTTATTCATATGGTGTGATTTTGCTTGAAATGATTACAGGCCGATTGCCCATTGTCCAAGTTGGTAATTCAGAAATGGACCTTGTTCAATGGATTCAGTTCTGCATTGATGAGAAGAAGCCACTCTCAGATGTATTAGATCCCTATTTAGCTGAAGATGCAGATAAGGAAGAGGAGATTATTGCAGTTTTGAAGATTGCTATTGCTTGTGTCAATAACAGCCCAGAAAAGAGACCCGTAATGAGGCATGTGCTTGATGCTTTGGATAGATTGTCCATATCCTCTGATTGA 2136 0.4265 MFQMVLLLLFLLCNSLVAPVSSLNVEGSLLLTLKRSIIADPERSLSNWNSSDENPCSWNGIACKEQSVVSISIPNRKLSGFLPSALGSLPQLRHVNLRNNKLFGSLPAELFQAQGLQSLVLYGNSFSGSVPNDIGKLRYLQTLDLSQNFFNGSLPAAIVKCKRLKTVVLSHNNFTGPLPDGFGGDLSSLEKLDLSFNQFNGSIPSDMGKLSSLQGTVDLSHNHFSGSIPGSLGNLPEKVYIDLTYNNLSGPIPQTGALMNRGPTAFIGNPGLCGPPLKNLCAPDTPGPSSPSSFPFLPDNYPPPDTDNGSGKSEKSKGLNKGAVIGIVVGDIIGICLLGLLFSYCYSRVCGFNQDQDENGFDKGGRVRKECLCFRKDESETLSDHVEQHDLVPLDAQVAFDLDELLKASAFVLGKSGIGIVYKVVLEDALTLAVRRLGEGGSQRLKEFQTEVEAIGKLRHPNIVTLRAYYWSVDEKLLIYDYIPNGTLATAIHGKAGLVTFTPLSWSDRIKIMKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHSMEPHISDFGLGRLANIAGGSPTLQSNRVAAEKPQERQKSLSTEVTTNILGNVYQAPETLKVVKPSQKWDVYSYGVILLEMITGRLPIVQVGNSEMDLVQWIQFCIDEKKPLSDVLDPYLAEDADKEEEIIAVLKIAIACVNNSPEKRPVMRHVLDALDRLSISSD 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2809g00019 711 SUPERFAMILY L domain-like 31 278 - -
Gabi2809g00019 711 Gene3D Phosphorylase Kinase; domain 1 376 482 - -
Gabi2809g00019 711 Pfam Leucine rich repeat N-terminal domain 26 63 IPR013210 -
Gabi2809g00019 711 ProSitePatterns Serine/Threonine protein kinases active-site signature. 531 543 IPR008271 GO:0004672|GO:0006468
Gabi2809g00019 711 MobiDBLite consensus disorder prediction 280 317 - -
Gabi2809g00019 711 SMART LRR_typ_2 137 161 IPR003591 -
Gabi2809g00019 711 SMART LRR_typ_2 89 113 IPR003591 -
Gabi2809g00019 711 SMART LRR_typ_2 186 210 IPR003591 -
Gabi2809g00019 711 Gene3D Ribonuclease Inhibitor 77 284 IPR032675 -
Gabi2809g00019 711 Gene3D Ribonuclease Inhibitor 16 76 IPR032675 -
Gabi2809g00019 711 Gene3D Transferase(Phosphotransferase) domain 1 483 710 - -
Gabi2809g00019 711 ProSiteProfiles Protein kinase domain profile. 407 706 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2809g00019 711 FunFam Leucine-rich repeat receptor-like protein kinase 23 180 - -
Gabi2809g00019 711 MobiDBLite consensus disorder prediction 288 302 - -
Gabi2809g00019 711 FunFam Leucine-rich repeat protein kinase family protein 483 709 - -
Gabi2809g00019 711 PANTHER OS05G0588300 PROTEIN 134 706 - -
Gabi2809g00019 711 Pfam Leucine rich repeat 90 148 IPR001611 GO:0005515
Gabi2809g00019 711 Pfam Leucine rich repeat 163 224 IPR001611 GO:0005515
Gabi2809g00019 711 SMART serkin_6 412 707 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2809g00019 711 FunFam Leucine-rich repeat receptor-like protein kinase 390 482 - -
Gabi2809g00019 711 FunFam Leucine-rich repeat receptor-like protein kinase 188 283 - -
Gabi2809g00019 711 SUPERFAMILY Protein kinase-like (PK-like) 412 703 IPR011009 -
Gabi2809g00019 711 CDD STKc_IRAK 413 706 - -
Gabi2809g00019 711 Pfam Protein kinase domain 413 700 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2809g00019 Gabi-Chr2809 159877 162378 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2809g00019 1 711 Receptor kinase-like Gene Family AT2G01210 69.071 0.0 1006
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Gabi2809g00019 Pkinase 8.3e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2809g00019 - - gmx:100810225 1204.5