Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2809g00016 ATGGAGGCGCAATCTACACAACAACCCACTCCTCCTCCACTCTCCTCCGTTTCGCCCCATCACAGCTACCCTGACTCCGTAGATTCCTCCCCGCGCTCCCGGAACACCGACTCATGGGACGAGCCCTACCCTCCACCAACCTCCAATAAGCTCCGCCTCATGTGCAGCTACGGCGGCCACATCGTCCCTCGCCCTCACGACAGGTCCCTCTGCTACGTCGGCGGCGACACCCGCATATTGGTGGTGGACCGCCACACCTCACTCTCGGATCTCTCAGCGCGACTCTCCAAAACCTTCCTTAACGGTAATCCCTTCTCCCTTAAATACCAGCTCCCAAGCGAGGACCTCGATTCACTTGTCTCTGTCACCACCGATGAAGACCTCGATAACATGATCGACGAGTACGATCACCGAACCCTCTCTTCTTCCTCCAAACCCTCGCGAATCCGTCTCTTCCTTTTCCCGGCCCAGCCCAATTCGCTTCAGTCCATTGGGCCGGTTCAACCGGGCTCGGCTACGACTAAGTCTGACGACTGGTTCCTTGATGCACTGAATACCGGCCGGGTTCTGTCGGACTCCTCATCCGTGAATTGCCTCCTCGGACTCGACGACGAGGTTGCTGCTGCTGCTGCTGCTGCTGTCGGGAACGACAACAGCAACAACAGCAACAACCTCAATTCATCCCATCCCGGGAATGGGAAGAATTTGAAGCAGGGACAGGATGTTCATTCTGTGCCGGATTCGCCTATGCTGGAGACGAATTCGTCTTTTGGGTCTACTTCGTCGTTGCCATCAATTGCGAATTTGCCGCCGATAAGGGTTCATGCCGAGGACGGTGGTGGTAACGGTGGTGGTGGTTTTGGGACTAGGGAGCAGGATCAGAAGGTGTTGGGGATTGAGGAACAGTTTGCTCAATTGGGTGTTGGTGGTGTGGAACAGAATTCGCAGCCGCAGCATCAGCCGCCGGCGCCGGCAGCTAATGTTTCCGTGGCTGCTTCACAGTCTCAGACTCAGACACAGCCTCAATCTCAAGCTCTGCCTCCTCAATTTCAACAGAAGTCAGCTGGTGTTGTTGATTTGCCTTCTCCTGATTCAGTTTCAAGCGATCGTAGTCTTTCAAATGCTATGTCACGCCCAATACCTGTAATCTATCAAGACCAAGTTCAAATTCAATCTGGAACTTCACGGGTTCCTAATACGTCTGTTGATCCGAATCTTTATATGTCTGATCCATATGGTGGGATCCAGATGCAGCAACATTTACAGGAACATGGATATGTATTGCAACAGCAATTTGATCAGCAGCAGCAGCAGCAGCAGCAGCATCATCAGCATCAGGAGGCTCAACAGGCACAACAGTTTATACATGGCACACATTTAATTCACCATACCCCTTCAGGGCCTGTGCCAATCCCTGCATATTATCCTGTATATCAGCAACAGCTCCATCCTCAGCATCACCATCAGCTTGATCAACAATATCAGGTTTACTATGTGCCCGCAAGACAGGCCCAACCATACAACTTGTCCATGCAGCAGGCTAATATTGGTGAATCTGCCACAACTATCTCTTCTAGCCAGCCCCAAAATCAGCCAAACCCTGCTCCATCTGCTGCTTACAACCCCATGAGAAATGCTCCCTTACCTATATCTGAAATGGCTGCAGGTTCGTACAGAACAGCAGCTGCCACCCCTCAATTTGTTCAAGTTCCTGCTGGTCAGCATCAGCAACAATATGTTGCATACTCCCAGATTCATCATCATCCTTCTCAACCAGTGGCCCCTAATTCTGCAGTACCTGCTAATTATGCTTATGACTATGCGGATTCTGCTTATGCTGAAATATTTTATACTCAACCTTTGGCACCCTCCATGCCTTCGCAGTACCAGACCATGACACCTGCGGAAGTTTCTGCTCAGCTTCCCTCGGATAACATGAAGCAGCAGATAAGAACCTCACAGCAATTATAA 1971 0.5119 MEAQSTQQPTPPPLSSVSPHHSYPDSVDSSPRSRNTDSWDEPYPPPTSNKLRLMCSYGGHIVPRPHDRSLCYVGGDTRILVVDRHTSLSDLSARLSKTFLNGNPFSLKYQLPSEDLDSLVSVTTDEDLDNMIDEYDHRTLSSSSKPSRIRLFLFPAQPNSLQSIGPVQPGSATTKSDDWFLDALNTGRVLSDSSSVNCLLGLDDEVAAAAAAAVGNDNSNNSNNLNSSHPGNGKNLKQGQDVHSVPDSPMLETNSSFGSTSSLPSIANLPPIRVHAEDGGGNGGGGFGTREQDQKVLGIEEQFAQLGVGGVEQNSQPQHQPPAPAANVSVAASQSQTQTQPQSQALPPQFQQKSAGVVDLPSPDSVSSDRSLSNAMSRPIPVIYQDQVQIQSGTSRVPNTSVDPNLYMSDPYGGIQMQQHLQEHGYVLQQQFDQQQQQQQQHHQHQEAQQAQQFIHGTHLIHHTPSGPVPIPAYYPVYQQQLHPQHHHQLDQQYQVYYVPARQAQPYNLSMQQANIGESATTISSSQPQNQPNPAPSAAYNPMRNAPLPISEMAAGSYRTAAATPQFVQVPAGQHQQQYVAYSQIHHHPSQPVAPNSAVPANYAYDYADSAYAEIFYTQPLAPSMPSQYQTMTPAEVSAQLPSDNMKQQIRTSQQL 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2809g00016 656 MobiDBLite consensus disorder prediction 216 266 - -
Gabi2809g00016 656 Gene3D - 69 155 - -
Gabi2809g00016 656 MobiDBLite consensus disorder prediction 19 43 - -
Gabi2809g00016 656 MobiDBLite consensus disorder prediction 432 451 - -
Gabi2809g00016 656 MobiDBLite consensus disorder prediction 1 46 - -
Gabi2809g00016 656 Pfam PB1 domain 68 155 IPR000270 GO:0005515
Gabi2809g00016 656 MobiDBLite consensus disorder prediction 520 544 - -
Gabi2809g00016 656 MobiDBLite consensus disorder prediction 311 373 - -
Gabi2809g00016 656 SMART PB1_new 65 156 IPR000270 GO:0005515
Gabi2809g00016 656 MobiDBLite consensus disorder prediction 311 358 - -
Gabi2809g00016 656 ProSiteProfiles PB1 domain profile. 50 156 IPR000270 GO:0005515
Gabi2809g00016 656 MobiDBLite consensus disorder prediction 520 538 - -
Gabi2809g00016 656 SUPERFAMILY CAD & PB1 domains 66 164 - -
Gabi2809g00016 656 CDD PB1_UP2 54 154 - -
Gabi2809g00016 656 PANTHER OS05G0427100 PROTEIN-RELATED 22 474 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2809g00016 Gabi-Chr2809 134130 136646 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2809g00016 50 194 MAP Kinase Kinase Kinase AT3G46920 38.356 3.55e-25 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2809g00016 - - qsa:O6P43_025756 682.945