Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2809g00006 ATGAATCAGTACTTTTTGCTGATAGCTTGCTTGCAGCTATGGTCTCTCATTACTCCAGTGAATCCAGCCAGTACATGGGGTCCACTTATCTTTATTTTTGCAGTCTCTGCATCAAAAGAGGCATGGGATGATTATAATAGATATCTTTCAGACAAAAAGGCAAATGAGAAGGAAGTGTGGGTTGTCAGGAAGGGCGTCAAGAAACTTATCCAAGCCCAGGATGTACATGTAGGTAATATAGTATGGCTACGTGAAAATGACGAAGTGCCTTGTGACCTTGTTTTGATTGGCACCTCTGATCCTCAAGGAGTTTGCTATATAGAGACTGCTGCACTGGATGGTGAAACTGATCTGAAGACACGGGTCTTACCTTCTGCTTGCATGGGAATCGATGTTGAACTATTGCACAAAATTAAGGGTGTAATTGAGTGTCCCAGTCCAGATAAAGACATCAGAAGATTTGATGCAAACATGCGGTTGTTCCCGCCATTTATTGATAATGATATATGCCCTTTAACCATTAAAAACACAATTCTTCAGTCATGTTACTTGAGAAACACTGAGTGGGCATGTGGAGTGGCTGTGTACACGGGCAATGAAACCAAACTGGGCATGAGTAGAGGTATCCCAGAACCAAAGCTCACTGCTATGGATGCCATGATTGACAAGTTGACTGGTGCTATATTTATTTTCCAAATTGTTGTTGTCATTGTTCTTGGCATAGCGGGTAATGTTTGGAAGGATACAGAAGCTAAGAAACAATGGTATGTTCTTTACCCTCATGAAGGCCCTTGGTATGAACTATTGATCATCCCTTTGCGGTTCGAGCTTCTTTGTTCCATCATGATACCCATTTCAATTAAGGTATCTCTGGATTTGATGAAGAGCTTGTATGCAAAGTTTATTGACTGGGATCATCAGATGATTGACCTAGAGACTAGTATTCCATCCCATGCAGCAAATACAGCGATAAGCGAGGACCTGGGACAAGTTGAGTACATTTTGACTGACAAAACAGGCACCCTCACTGAGAATAAGATGATATTTAGAAGATGTTGTATTAGTGGCATTTTCTATGGAAATGACAATGGAGATGCATTGAAAGATGTAGAGCTTCTCAATGCTGTTTCCAGTGGTTCTCCTGATGTTGTACGATTTCTTACTGTTATGGCAATATGTAATACTGTGATACCTACGCTAAGCAAAACTGGAGATATCTTGTATAAGGCACAGTCTCAGGATGAAGATGCTCTTGTTCAAGCTGCTGCTCGGATGCATATGGTTTTCTTCAATAAGAGTGGAAACATTCTAGAAGTCAAGTTCAATGCTTCAATACTTCAGTATGAAGTCCTGGAAACCTTAGAGTTCACCTCTGATAGGAAAAGAATGTCAGTAGTGTTGAAAGATTGCCAAAATGGAAAGATCCTTCTCCTGTCTAAAGGTGCAGATGAGGCTATTCTTCCATATGCTCGTGTTGGGCAGCAAACTCGGCACTTCATTGAAGCTGTAGAGCAATATGCTCACTTGGGATTACGTACGCTATGTTTGGCTTGGCGTGAGTTAAAGGGGGATGAATATCAAGAATGGTCTTTGATGTTTAAAGAGGCTAGTAGCACTTTGGTTGATAGGGAGTGGAGAGTAGCTGAGGTCTGCCAAAGAGTAGAACATGACTTGGAAATTCTTGGTGTAACAGCAATAGAGGATCGGTTACAGGATGGAGTTCCTGAAACAATAGAAACACTAAGAAAAGCTGGAATAAATTTTTGGATGCTAACAGGAGACAAGCAGAATACCGCAATACAAATTGCCCTGTCGTGTAATTTTATTTCCCCAGAACCGAAGGGACAGCTTCTATCAATTGATGGAAAAACAGAAGATGAGGTTCGAAGAAGTTTAGAGAGAGTGCTTCTTACAATGCGGATAACTACCTCAGAACCTAAGGATGTGGCTTTTGTTGTTGATGGCTGGGCCCTTGAGATTGCACTTAACCACTACCGAAAAGCTTTCACTGAGCTGGCAGTATTGTCAAGGACTGCCATATGTTGTCGTGTGACACCATCACAAAAAGCACAGCTTGTACAGATCTTAAAATCATGTGACTACAGAACATTAGCAATTGGTGATGGTGGGAATGATGTAAGGATGATACAACAAGCCGATATTGGTGTGGGCATCAGTGGAAGAGAAGGATTGCAGGCAGCAAGAGCGGCAGATTACAGTATTGGAAAGTTTAGATTCCTGAAAAGATTAATTCTGGTCCATGGCCGGTACTCCTACAACCGCACTGCATTTCTTTCTCAATATTCATTCTATAAGTCCCTACTGATATGTTTCATTCAAATCTTTTTTTCATTTATTTCAGGCGTCTCCGGAACTAGCCTCTTTAATTCTGTTAGCTTGATGGCTTATAATGTTTTCTACACTAGTGTTCCTGTTCTAGTCAGTGTGCTTGACAAAGATCTTAGTGAGGAAACTGTGATGCAGCATCCTCAGATTTTATTTTATTGCCAAGCCGGGAGGCTTCTAAATCCTAGTACATTTGCTGGATGGTTTGGGCGATCTCTCTTCCATGCAATTGTTGTATTTTTAATAAGCATACATGCCTATGCCTATGATAAAAGCGAAGTGGAAGAGGTTTCAATGGTTGCACTCTCTGGTTGTATATGGTTGCAGGCTTTTGTTGTAACAATGGAAACCAATTCCTTTACGATATTGCAACATCTTGCTATATGGGGTAATTTGGCTGTCTTTTATGGCATCAACTGGATTTTCAGTGCTCTTCCTTCATCAGGGATGTACACAATCATGTTTCGGTTGTGTCGGCAACCATCATATTGGATAGCAGTTTTTCTCATGGTTGCAGCCGGGATGGGTCCAATTCTAGCCATTAAGTACTTTCGATATACATATAGACCGAGCAAAATCAATACACTTCAGCAGGCTGAACGTCTGGGTGGGCCAATTTTATTTCTTGGCACCATTGAGCCTCAGCCCAGATCTGTAGAGAAAGATGTTTCTACCTTGTCAATAACGCAATCCAAAAACAGAAATCCTGTGCATGAACCTCTGTTATCAGATTCTCCAAATTCCACCAGAAGATCTTTTGGAGCAGGAACACCATTTGATCTTTTTCAGTCACAATCAAGATTATCGCTGTCTAGCTACACAAGAAATTGCAAGGACAACTGA 3189 0.4114 MNQYFLLIACLQLWSLITPVNPASTWGPLIFIFAVSASKEAWDDYNRYLSDKKANEKEVWVVRKGVKKLIQAQDVHVGNIVWLRENDEVPCDLVLIGTSDPQGVCYIETAALDGETDLKTRVLPSACMGIDVELLHKIKGVIECPSPDKDIRRFDANMRLFPPFIDNDICPLTIKNTILQSCYLRNTEWACGVAVYTGNETKLGMSRGIPEPKLTAMDAMIDKLTGAIFIFQIVVVIVLGIAGNVWKDTEAKKQWYVLYPHEGPWYELLIIPLRFELLCSIMIPISIKVSLDLMKSLYAKFIDWDHQMIDLETSIPSHAANTAISEDLGQVEYILTDKTGTLTENKMIFRRCCISGIFYGNDNGDALKDVELLNAVSSGSPDVVRFLTVMAICNTVIPTLSKTGDILYKAQSQDEDALVQAAARMHMVFFNKSGNILEVKFNASILQYEVLETLEFTSDRKRMSVVLKDCQNGKILLLSKGADEAILPYARVGQQTRHFIEAVEQYAHLGLRTLCLAWRELKGDEYQEWSLMFKEASSTLVDREWRVAEVCQRVEHDLEILGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVRRSLERVLLTMRITTSEPKDVAFVVDGWALEIALNHYRKAFTELAVLSRTAICCRVTPSQKAQLVQILKSCDYRTLAIGDGGNDVRMIQQADIGVGISGREGLQAARAADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGVSGTSLFNSVSLMAYNVFYTSVPVLVSVLDKDLSEETVMQHPQILFYCQAGRLLNPSTFAGWFGRSLFHAIVVFLISIHAYAYDKSEVEEVSMVALSGCIWLQAFVVTMETNSFTILQHLAIWGNLAVFYGINWIFSALPSSGMYTIMFRLCRQPSYWIAVFLMVAAGMGPILAIKYFRYTYRPSKINTLQQAERLGGPILFLGTIEPQPRSVEKDVSTLSITQSKNRNPVHEPLLSDSPNSTRRSFGAGTPFDLFQSQSRLSLSSYTRNCKDN 1062
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2809g00006 1062 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 1 983 - -
Gabi2809g00006 1062 NCBIfam HAD-IC family P-type ATPase 673 790 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Gabi2809g00006 1062 NCBIfam HAD-IC family P-type ATPase 555 617 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Gabi2809g00006 1062 FunFam Phospholipid-transporting ATPase 405 548 - -
Gabi2809g00006 1062 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 342 531 IPR023299 GO:0000166
Gabi2809g00006 1062 Pfam Cation transport ATPase (P-type) 392 488 - -
Gabi2809g00006 1062 NCBIfam phospholipid-translocating P-type ATPase 381 979 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Gabi2809g00006 1062 Gene3D - 561 746 IPR023214 -
Gabi2809g00006 1062 Gene3D - 405 560 IPR023299 GO:0000166
Gabi2809g00006 1062 SUPERFAMILY Calcium ATPase, transduction domain A 56 204 IPR008250 -
Gabi2809g00006 1062 PRINTS P-type cation-transporting ATPase superfamily signature 706 725 - -
Gabi2809g00006 1062 PRINTS P-type cation-transporting ATPase superfamily signature 108 122 - -
Gabi2809g00006 1062 PRINTS P-type cation-transporting ATPase superfamily signature 584 594 - -
Gabi2809g00006 1062 PRINTS P-type cation-transporting ATPase superfamily signature 335 349 - -
Gabi2809g00006 1062 SUPERFAMILY HAD-like 330 761 IPR036412 -
Gabi2809g00006 1062 FunFam Phospholipid-transporting ATPase 31 207 - -
Gabi2809g00006 1062 Pfam E1-E2 ATPase 55 248 - -
Gabi2809g00006 1062 SFLD Haloacid Dehalogenase 320 757 - -
Gabi2809g00006 1062 ProSitePatterns E1-E2 ATPases phosphorylation site. 337 343 IPR018303 -
Gabi2809g00006 1062 Pfam Phospholipid-translocating P-type ATPase C-terminal 734 973 IPR032630 -
Gabi2809g00006 1062 Gene3D - 31 207 - -
Gabi2809g00006 1062 SFLD p-type atpase 320 757 IPR044492 -
Gabi2809g00006 1062 SUPERFAMILY Calcium ATPase, transmembrane domain M 1 972 IPR023298 -
Gabi2809g00006 1062 FunFam Phospholipid-transporting ATPase 558 745 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2809g00006 Gabi-Chr2809 42273 56895 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2809g00006 1 1062 Primary Pumps ATPases AT5G44240 85.513 0.0 1927
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2809g00006 K01530 - gmx:100786505 2003.41