Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2808g00035 ATGAGGTCGCTCTCCTTCGCTCTGGATGAGATCGGTCGAGTGGTCTCAGTTGGAGATGGGATTGCACGTGTTTATGGATTGAACGAGATTCAAGCTGGTGAAATGGTTGAATTTGCCAGCGGTGTGAAAGGAATAGCGTTGAATCTTGAGAATGAGAATGTCGGAATTGTTGTCTTTGGTAGTGATACCGCTATAAAAGAAGGAGATCTTGTCAAACGCACTGGATCTATTGTGGATGTTCCTGCGGGAAAGGCTATGCTAGGGCGTGTGGTCGACGCGTTGGGAGTACCTATTGATGGAAGAGGGGCTCTAAGCGATCACGAGCGAAGACGTGTCGAAGTGAAAGCCCCTGGGATTATAGAACGTAAATCTGTGCACGAGCCTATGCAAACAGGGTTAAAAGCGGTAGATAGCCTGGTTCCTATAGGCCGTGGTCAACGAGAACTTATAATCGGGGACCGACAAACTAAAACAGCTATTGCTATCGATACCATATTAAACCAAAAGCAAATGAACTCAAGGGCCACCTCTGAGAGTGAGACATTGTATTGTGTCTATGTAGCGATTGGACAGAAACGCTCAACTGTGGCACAATTAGTTCAAATTCTTTCAGAAGCGAATGCTTTAGAATATTCCATTCTTGTAGCAGCCACCGCTTCGGATCCTGCACCTCTGCAATTTCTGGCCCCATATTCTGGGTGTGCCATGGGGGAATATTTCCGCGATAATGGAATGCACGCATTAATAATCTATGATGATCTTAGTAAACAGGCCGTGGCATATCGACAAATGTCATTATTGTTACGCCGACCACCAGGCCGTGAGGCTTTCCCAGGCGATGTTTTCTATTTACATTCCCGTCTCTTAGAAAGAGCCGCTAAACGATCGGACCAGACAGGTGCAGGTAGCTTGACCGCATTACCCGTCATTGAAACACAAGCGGGAGACGTATCGGCCTATATTCCAACCAATGTGATCTCCATTACTGATGGACAAATATGTTTGGAAACAGAGCTCTTTTATCGCGGAATTAGACCTGCTATTAACGTCGGCTTATCTGTCAGTCGCGTCGGGTCTGCCGCTCAGTTGAAAGCTATGAAACAAGTCTGCGGGAGTTTAAAACTTGAATTGGCACAATATCGCGAAGTGGCCGCCTTTGCTCAATTTGGCTCAGACCTTGATGCTGCGACTCAGGCATTACTCAATAGAGGTGCAAGGCTTACAGAAGTACTGAAACAACCACAATATGCACCACTTCCAATTGAAAAACAAATTCTAGTCATTTATGCAGCTGTCAATGGATTCTGTGATCGAATGCCATTAGACAAAATTGCTCAATATGAGAGAGCCATTCTAAGTACTATAAAACCAGAATTACTACAATCACTAAAAGGTGGACTAACTAGCGAAAGAAAGATAGAACCAGAGAAATTCTTAAAAGAAAAAGCAATTTCAATATATGGAATGAAAATGCATGAACAATAA 1485 0.4418 MRSLSFALDEIGRVVSVGDGIARVYGLNEIQAGEMVEFASGVKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGRGALSDHERRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTKTAIAIDTILNQKQMNSRATSESETLYCVYVAIGQKRSTVAQLVQILSEANALEYSILVAATASDPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGDVFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVISITDGQICLETELFYRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSLKLELAQYREVAAFAQFGSDLDAATQALLNRGARLTEVLKQPQYAPLPIEKQILVIYAAVNGFCDRMPLDKIAQYERAILSTIKPELLQSLKGGLTSERKIEPEKFLKEKAISIYGMKMHEQ 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2808g00035 494 Gene3D - 78 362 IPR027417 -
Gabi2808g00035 494 PANTHER ATP SYNTHASE SUBUNIT ALPHA, MITOCHONDRIAL 5 483 IPR005294 GO:0015986|GO:0045261|GO:0046933
Gabi2808g00035 494 Pfam ATP synthase alpha/beta chain, C terminal domain 362 463 IPR000793 GO:0015986
Gabi2808g00035 494 PIRSF F_ATPase_subunit_alpha 2 490 IPR005294 GO:0015986|GO:0045261|GO:0046933
Gabi2808g00035 494 Gene3D - 363 485 IPR038376 -
Gabi2808g00035 494 CDD F1-ATPase_alpha_CD 77 358 IPR033732 GO:0032559
Gabi2808g00035 494 Gene3D - 9 77 IPR023366 -
Gabi2808g00035 494 ProSitePatterns ATP synthase alpha and beta subunits signature. 346 355 IPR020003 GO:0005524
Gabi2808g00035 494 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 79 361 IPR027417 -
Gabi2808g00035 494 Hamap ATP synthase subunit alpha [atpA]. 4 492 IPR005294 GO:0015986|GO:0045261|GO:0046933
Gabi2808g00035 494 CDD ATP-synt_F1_alpha_C 366 481 IPR000793 GO:0015986
Gabi2808g00035 494 SUPERFAMILY N-terminal domain of alpha and beta subunits of F1 ATP synthase 5 77 IPR036121 GO:0046034|GO:1902600
Gabi2808g00035 494 FunFam ATP synthase subunit alpha 363 487 - -
Gabi2808g00035 494 FunFam ATP synthase subunit alpha 2 76 - -
Gabi2808g00035 494 SUPERFAMILY C-terminal domain of alpha and beta subunits of F1 ATP synthase 364 464 - -
Gabi2808g00035 494 NCBIfam F0F1 ATP synthase subunit alpha 7 464 IPR005294 GO:0015986|GO:0045261|GO:0046933
Gabi2808g00035 494 CDD ATP-synt_F1_alpha_N 10 75 - -
Gabi2808g00035 494 Pfam ATP synthase alpha/beta family, beta-barrel domain 10 75 IPR004100 GO:0046034|GO:1902600
Gabi2808g00035 494 FunFam ATP synthase subunit alpha, mitochondrial 77 362 - -
Gabi2808g00035 494 Pfam ATP synthase alpha/beta family, nucleotide-binding domain 132 355 IPR000194 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2808g00035 Gabi-Chr2808 382936 389590 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2808g00035 43 361 Primary Pumps ATPases(2) AT4G38510 26.748 9.23e-25 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2808g00035 K02132 - gmx:15308608 901.738