Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2807g00007 ATGGAGAATCCAATGGAACGAATGGAGGTCCAACTGGTAATGGAGGCTCAATCGGAGCTGGTGGTCCGAACGGTGGTGGTTGCGCTGGCAGCGCGGACGGAGGGATCGTTGGAGGGAATACGGGAAACAACGAAAATTCCGTGCGAAAACTGGAGTTACCTCTATTATGTCAAGTGGAGTAACGTGTTGGCCTTTGGTTCAGAAGGTATCAAAAGAGCATCATTTGTTGCAAACAAAGCAACTTCGAAAGTAGTGGACGTGCCAAAGGGCTATCTTGCAGTGTATGTTGGAGAGAAAATGAAGCGGTTTGTGATTCCCATATCATATTTGAACCAACCTTCATTTCAATACTTGCTGAGCCAAGCTGAGGAAGAATTCGGGTATGATCATCCACTCGGTGGTCTCACAATTCCTTGCAGAGAAGATGTGTTCTTCGATATCACTTCTCGCTTGGATAGGTGCTAA 465 0.4667 MENPMERMEVQLVMEAQSELVVRTVVVALAARTEGSLEGIRETTKIPCENWSYLYYVKWSNVLAFGSEGIKRASFVANKATSKVVDVPKGYLAVYVGEKMKRFVIPISYLNQPSFQYLLSQAEEEFGYDHPLGGLTIPCREDVFFDITSRLDRC 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2807g00007 154 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 81 151 IPR003676 GO:0009733
Gabi2807g00007 154 Pfam Auxin responsive protein 59 150 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2807g00007 Gabi-Chr2807 26246 27297 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2807g00007 86 144 Calmodulin-binding Proteins AT3G43120 57.627 2.33e-19 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2807g00007 K14488 - gmx:100806671 145.591