Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2801g00016 ATGGCTAGCGTTTGGAAGTCATGGTGTGTTTTGGTTACTGCACTTCATTTGTTGCACATCACGTCTTCAAATTTCATGGTCGATAATCTACCAGGTTTTGGGAAACTTCCATTCATGTTGGAAACCGGGTACGTAGGAGTGGGTGAAAGAGAAGAGGTGCAACTATTTTATTATTTTGTTGAATCTGAAAGGAATCCCATGAATGATCCACTCCTACTTTGGCTTGTTGGAGGTCCTGGTTGCTCTGCCCTTGCTTCTTTCTTCTATGAAAATGGACCACTTAAGTTTAATTATGACAATGTTAATGGCAGTTTTCCAGAACTTCAATTGAATCCAAATGCTTGGACGAAGGTACTCAACATATTATATATCGATGCACCCGTTGGCACAGGATTTTCTTACTCAAAAACCCAGCAAGGTTATTATAGCAATGACAAGCAATGGGTGGAACATATGTATGATTTTCTACAAAAGTGGCTTGTGGATCACCCCAAATTCAGATCAAATCAACTTTACATAGGTGGTGGATCATATTCAGGCATGATTGTTACTCCCCTTGTGCAAAAAGTATATGAAGGTTATAAAGCAGGAAATTTACCACTCCTAAACATTCAAGGTTTTGTGCTTGCAAGTCCATCGATTGACTCTTACCAGGACATTAATACAAGAGTTCAATATGCTCACCAACGAACACTTGTATCAAATGAGCTATATGAGTCAATCAAAGCTAGTTGTAATGGAGATTATATCAGTCTTAATCCGAACAATGCAAATTGCATGTCAGATTATGAAGCCTACTCGGAGTCAGTCCGTTACATAAACATGTTTCAAATTATGCAACCAAGTTGTATCAAAGGGTCTCACAAGAATCAAAGAAGGCTCTTTGAAAACCTCGAAACTATTCACCAATCAACATTTAGGTGTCAGGAAGAAGAAAATGCATTAGTTGAATTGTGGGCAAATGATCCAAATGTTCAAAAGAATCTCAATGTTAGAGAGGGAACGAAAGGACATTTCGAAAGATGCAATAATATTAGTGATACATATACAAAGAATGTTCATAGTGTTGTTGAATATCATCAGAATCTCACCAGCACAAACCTTCGATCTCTAATTTACATCGGCGATCTTGACATGTCGATACCTTATCTTAGTACACATTCTATAATTAAGTCACTTAATTTGAACTTGAATAGCACTTGGCGTCCGTGGTTCACTGACGGTGAAGTGGCAGGGTATACAGAGAGATATAAAAAGAATGAGTATCACCTAACATATGCCACTGTTAAGGGAGGGGGGCACGTAGCTCAAGAATACAGTCGCAAAGAGATTTATGAGATGATCCATAGATGGTTCTCATATTATGATATCTAA 1374 0.3799 MASVWKSWCVLVTALHLLHITSSNFMVDNLPGFGKLPFMLETGYVGVGEREEVQLFYYFVESERNPMNDPLLLWLVGGPGCSALASFFYENGPLKFNYDNVNGSFPELQLNPNAWTKVLNILYIDAPVGTGFSYSKTQQGYYSNDKQWVEHMYDFLQKWLVDHPKFRSNQLYIGGGSYSGMIVTPLVQKVYEGYKAGNLPLLNIQGFVLASPSIDSYQDINTRVQYAHQRTLVSNELYESIKASCNGDYISLNPNNANCMSDYEAYSESVRYINMFQIMQPSCIKGSHKNQRRLFENLETIHQSTFRCQEEENALVELWANDPNVQKNLNVREGTKGHFERCNNISDTYTKNVHSVVEYHQNLTSTNLRSLIYIGDLDMSIPYLSTHSIIKSLNLNLNSTWRPWFTDGEVAGYTERYKKNEYHLTYATVKGGGHVAQEYSRKEIYEMIHRWFSYYDI 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2801g00016 457 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 28 439 IPR001563 GO:0004185|GO:0006508
Gabi2801g00016 457 PRINTS Carboxypeptidase C serine protease (S10) family signature 159 184 IPR001563 GO:0004185|GO:0006508
Gabi2801g00016 457 PRINTS Carboxypeptidase C serine protease (S10) family signature 424 437 IPR001563 GO:0004185|GO:0006508
Gabi2801g00016 457 PRINTS Carboxypeptidase C serine protease (S10) family signature 111 123 IPR001563 GO:0004185|GO:0006508
Gabi2801g00016 457 PRINTS Carboxypeptidase C serine protease (S10) family signature 124 134 IPR001563 GO:0004185|GO:0006508
Gabi2801g00016 457 FunFam Serine carboxypeptidase-like 19 20 289 - -
Gabi2801g00016 457 SUPERFAMILY alpha/beta-Hydrolases 27 455 IPR029058 -
Gabi2801g00016 457 Gene3D alpha/beta hydrolase 21 295 IPR029058 -
Gabi2801g00016 457 Gene3D - 306 455 - -
Gabi2801g00016 457 FunFam Carboxypeptidase 305 456 - -
Gabi2801g00016 457 Pfam Serine carboxypeptidase 35 453 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2801g00016 Gabi-Chr2801 258978 265082 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2801g00016 314 453 Calmodulin-binding Proteins AT2G22960 42.143 4.52e-31 116