Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi279g00003 ATGTTAGACATGGAGCTCAGCACTATGTTTTACTTGTTTGCTTCTTTTCTCTTCATTGTTCTCTTCAACTCACTCATCAAATCCTTCTTCTTCCCCTCCAAAGGTAGAGAATTACCACTCCCACCTGGTTCCATGGGTTGGCCTTACATAGGAGAAACCTTCCAAATGTATTCTCAAGACCCAAATGTTTTCTTTGCTACAAAAATCAAGAGGTATGGCTCTATGTTCAAGTCACATATTCTTGGTTGTCCTTGTGTGATGATTTCTAACCCAGAAGCAGTGAAATTTGTGTTGAACAAAGCTCAACTCTTCAAACCAACATTTCCTGCTAGCAAAGAAAGGATGTTGGGGAAGCAAGCAATTTTCTTTCACGAAGGAGAGTACCATGCTAACCTTAGGAGGCTTGTTCTTCGTACTTTCATGCCTGAAGCCATCAAAAACGTTGTTTCTGACATTGAATCCATTTCCCAAACTTGCCTCAAATCATGGGAAGGAAAGTTGATCACCACTTTCCTTGAAATGAAAACTTTCACGTTCCATGTTGCTCTGCTTTCAATTTTTGGGAAAGATGAAATTCTTTACAGAGAGGATCTGAAACGATGCTATTACACACTTGAGAAAGGGTACAACTCAATGCCCATAAACCTTCCAGGGACACTGTTCCACAAGGCTATGAAGGCAAGGAAAGAGCTTTCTCAGATCTTGGAACAAATCATCTCAACAAGGAGGAAGATGAAGCAAGATTACAATGACTTGTTGGGTTCATTCATGGGTGAGAAAACAGGCCTCACAGATGAACAGATAGCAGATAACATCATTGGTGTCATTTTTGCTGCTCGTGACACCACTGCAACTGTGCTTACGTGGATTATCAAATACCTTGATGAAAACCCCAGCGTTCTAGAAGCTGTGACAGAAGAGCAAGAGTCCATATTGAAGGGCAAGGAAGAAAGTGTAGAAGAAATGGGTCTGAATTGGGCAGACACAAAAAAGATGCCAATAACTTCAAGGGTCATACAGGAGACTCTAAGAGTTGCTTCAATTTTGTCTTTTACTTTCAGAGAGGCAGTGGACGACGTTGAATATCAAGGGTATCTCATACCAAAAGGGTGGAAAGTGTTACCACTTTTTAGAAACATACACCACAGTCCAGATAACTTCAAAGAGCCAGAGAAATTTGACCCTTCAAGATTTGAGGTTGCTCCAAAAGCCAATACATTTATGCCATTTGGCAATGGGACCCATGCATGTCCTGGGAATGAATTAGCCAAGTTGGAGATTTTGGTGTTTCTACATCATTTGACCACAAAGTACAGGTGGTCTGTGGTAGGTGCAAAAAATGGGATTCAGTATGGACCTTTTGCACTTCCCCAAAATGGCTTGCCCATTACATTATATCCTAAGAAATAA 1410 0.4092 MLDMELSTMFYLFASFLFIVLFNSLIKSFFFPSKGRELPLPPGSMGWPYIGETFQMYSQDPNVFFATKIKRYGSMFKSHILGCPCVMISNPEAVKFVLNKAQLFKPTFPASKERMLGKQAIFFHEGEYHANLRRLVLRTFMPEAIKNVVSDIESISQTCLKSWEGKLITTFLEMKTFTFHVALLSIFGKDEILYREDLKRCYYTLEKGYNSMPINLPGTLFHKAMKARKELSQILEQIISTRRKMKQDYNDLLGSFMGEKTGLTDEQIADNIIGVIFAARDTTATVLTWIIKYLDENPSVLEAVTEEQESILKGKEESVEEMGLNWADTKKMPITSRVIQETLRVASILSFTFREAVDDVEYQGYLIPKGWKVLPLFRNIHHSPDNFKEPEKFDPSRFEVAPKANTFMPFGNGTHACPGNELAKLEILVFLHHLTTKYRWSVVGAKNGIQYGPFALPQNGLPITLYPKK 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi279g00003 469 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 410 419 IPR017972 GO:0005506|GO:0016705
Gabi279g00003 469 PRINTS E-class P450 group I signature 376 400 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi279g00003 469 PRINTS E-class P450 group I signature 69 88 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi279g00003 469 PRINTS E-class P450 group I signature 407 417 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi279g00003 469 PRINTS E-class P450 group I signature 267 284 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi279g00003 469 PRINTS E-class P450 group I signature 287 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi279g00003 469 PRINTS E-class P450 group I signature 336 354 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi279g00003 469 PRINTS E-class P450 group I signature 417 440 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi279g00003 469 PRINTS P450 superfamily signature 408 417 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi279g00003 469 PRINTS P450 superfamily signature 337 348 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi279g00003 469 PRINTS P450 superfamily signature 417 428 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi279g00003 469 PRINTS P450 superfamily signature 278 295 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi279g00003 469 CDD CYP90-like 69 467 - -
Gabi279g00003 469 PANTHER CYTOCHROME P450 26 37 445 - -
Gabi279g00003 469 FunFam Abscisic acid 8 31 467 - -
Gabi279g00003 469 Gene3D Cytochrome P450 31 467 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi279g00003 469 SUPERFAMILY Cytochrome P450 36 467 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi279g00003 469 Pfam Cytochrome P450 41 443 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi279g00003 Gabi-Chr279 37224 40128 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi279g00003 4 463 Cytochrome P450 AT4G19230 72.138 0.0 692