Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2797g00032 ATGTCCTCCGAAGACATGGGTCTCGTTCCTGACCAGAGGATCGAAAACGGTCTCAACTCGCCTCTAGTCTTCCAAGACGACCCCTTGCGCTTCAACTGTGGCCCCGCACAGCGCCGGGTCGGGGACCCGGGTCCGAAACCCAGGGACCTCGGTGGTTTCGTCGACGACAAGATGTTCGCCATGGAGCGCGACCGGTTTTTTGCCGCCCAGGGCACCGATTTCCGCCGCAACATTTTCGGCGATTGTTCGGGTCGCCGAGACCCGCCTAATGCCCGCAATTGGGGCGGGAACGGCGGCGCCGCAACTCCAAGCGGCGATGAATCGGACGATGACGAAGACGATGACGAAGATGATGATGACGAGGATGACGAAGACGGCGAAGTAGAAGGACTCGTTGGTGTTGGTGATGGGAGCAAGCGCAATCTCAATGCAATCAATGACGTTAATAATAACAACGGTAACGGTGGTGGTAATTTGCCTGGTGTTTCAAATGGGAAAGCCCAGCATCATTCCCCTTATGTTTCTGGTAGAGAGTTATTGGGGAAGGATGGTGACATTGGACAGCTAGTGCATAATAATGCGAGTGGTACTGATGAAGATCATCATCGAGAAAGATTAGGTAAATCCCAGAATTCTGTTACCGTTGCTGAAACTGACTGTGAGGACTACTATTCGCACTATCTTCAAGGCACGGAAGGGTCAGCTTCTGGGCAGAAAGTTATGGTGGATGACAATGGTTGTGGGTTTAGTGGAAGAAAAGATGTTATGTATTCATCCGAGTCAGGGGAATCATTGAGGGCTATTCTTTCAGATCCTGTTACGGGAGCTCTTATGGATGATGCAATGATATTACCTTGTGGACATTCATTTGGTGGAGGTGGAATACAGCATGTTATTAGAATGAAAGCTTGCTTCACTTGTTCTCAACCCACATCTGAGGAATCAATATCTCCAAACCTATCACTTCGAGCTGCTGTGCAGGCATACCGTCGGGAAGAGGAGTCACAATTTTACCGGTCATCCAAAAGAAGAAGAGAAAGATTTGATCAGGGTGGTTTTGGAGATTCAGCTGCTATGGAACCACCAAGGAGTAGAGGTGTTCAATTTCCATTTGCTGTGATGGACCGGGTTATCATAAAGGGAAACAAAAGGACACCCCAACGCTTTGTTGGGCGCGAAGCTATTGTAACAACACAATGCCTGAATGGATGGTATGTGGTGAAGACATTGGACAATGCGGAGAGTGTAAAATTGCAGTATCGCTCTCTTGCTAAGGTTTTGGATGATCCTTCAAAACCCGCCTCCAACAAGATGGGACCTAATTGGCTTTAG 1332 0.4895 MSSEDMGLVPDQRIENGLNSPLVFQDDPLRFNCGPAQRRVGDPGPKPRDLGGFVDDKMFAMERDRFFAAQGTDFRRNIFGDCSGRRDPPNARNWGGNGGAATPSGDESDDDEDDDEDDDDEDDEDGEVEGLVGVGDGSKRNLNAINDVNNNNGNGGGNLPGVSNGKAQHHSPYVSGRELLGKDGDIGQLVHNNASGTDEDHHRERLGKSQNSVTVAETDCEDYYSHYLQGTEGSASGQKVMVDDNGCGFSGRKDVMYSSESGESLRAILSDPVTGALMDDAMILPCGHSFGGGGIQHVIRMKACFTCSQPTSEESISPNLSLRAAVQAYRREEESQFYRSSKRRRERFDQGGFGDSAAMEPPRSRGVQFPFAVMDRVIIKGNKRTPQRFVGREAIVTTQCLNGWYVVKTLDNAESVKLQYRSLAKVLDDPSKPASNKMGPNWL 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2797g00032 443 Pfam U-box domain 270 334 IPR003613 GO:0004842|GO:0016567
Gabi2797g00032 443 MobiDBLite consensus disorder prediction 33 52 - -
Gabi2797g00032 443 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 264 334 IPR013083 -
Gabi2797g00032 443 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 62-RELATED 4 437 - -
Gabi2797g00032 443 MobiDBLite consensus disorder prediction 193 212 - -
Gabi2797g00032 443 MobiDBLite consensus disorder prediction 1 21 - -
Gabi2797g00032 443 SUPERFAMILY RING/U-box 263 335 - -
Gabi2797g00032 443 MobiDBLite consensus disorder prediction 105 130 - -
Gabi2797g00032 443 MobiDBLite consensus disorder prediction 80 171 - -
Gabi2797g00032 443 MobiDBLite consensus disorder prediction 142 170 - -
Gabi2797g00032 443 MobiDBLite consensus disorder prediction 336 361 - -
Gabi2797g00032 443 MobiDBLite consensus disorder prediction 336 351 - -
Gabi2797g00032 443 ProSiteProfiles U-box domain profile. 264 336 IPR003613 GO:0004842|GO:0016567
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2797g00032 Gabi-Chr2797 322530 328670 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2797g00032 209 443 Plant U-box Gene Family AT5G05230 61.157 2.18e-90 277