Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2797g00027 ATGGTTCTTCATCGCCGCCTGTTGCTTGACCCAGATTCAAGCTCAACTGCACCAGGTAACGTGAATAGAACAAGGGATTCTTTCACAGGAGACGCAAATTTTGACACCAACATGGTGATTATCTTGGCAGCTTTGCTTTGTGCACTTATATGTGCTCTTGGACTTAACTCAATTGTGCGCTGTGCTCTAAGATGTAGCCGCAGGTTGGCTTTTGAGACACCAGAGGAGGCTGCAGCTCGTGCAGCAGCAAAAGGACTAAAGAAAAGGGCATTGCATCAGATCCCTATAGCTGTTTATGGTTCAGACAGTCTTTGCTTGAGCAACCAACAATTTTTGAAGCCGCAACCGCAGCTGCAGGAACCTCGAACCATGTAG 375 0.472 MVLHRRLLLDPDSSSTAPGNVNRTRDSFTGDANFDTNMVIILAALLCALICALGLNSIVRCALRCSRRLAFETPEEAAARAAAKGLKKRALHQIPIAVYGSDSLCLSNQQFLKPQPQLQEPRTM 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2797g00027 124 PANTHER RING-H2 FINGER PROTEIN ATL78 17 102 IPR044602 GO:0016567|GO:0016740
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2797g00027 6 101 C3H Transcription Factor Family AT3G10910 52.885 7.20e-26 94.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2797g00027 - K19040 pvu:PHAVU_009G143000g 140.198