Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2797g00026 ATGTCGTTGCCGTATCACCGGCGATCTCAATCGGAGGTCCATTTCCGGATCCCCGATGACTTCGACCTCGAACTCGATCCCTTCGATGCCCCTCCCCTCCATTTCCAAGATCCCGCCCCGAACGACGACCTCTTCTCCGCTTACGTTGATTCCGACAAATCCGGATCCAAACTCCAATCGCCGCCACCCTCCGCCACCGCAGAGAGCAGCAAAACCGGTAGGCCCGGTCACCGCCGCAGCAATTCGGCCGATGCGTCTTCTTCGTTATTGTCTGAGGGCATTGAGGCTAAGAAGGCCATGTCCCCTGATAAGCTCGCTGAATTGTGGACCGTTGATCCCAAGCGAGCCAAGAGGATTCTGGCCAACCGCCAATCTGCCGCGCGCTCAAAAGAGAGGAAAGCTTGTTATGTGTTGGAGCTTGAGAGAAAAATTCAAACTCTTCAAACAGAAGCAACTACCCTTTCAGCTCAATTAAATCTTTTCCAGCGAGATACATCTGGTCTGACTACTGAAAATACGGAGTTGAAGCTTCGGTTACAAGCCATGGAGCAACAAGCTAAGTTATGTGATGCTCTAAATGAAGCCCTGAAGAAAGAAGTTGATAGGCTCAAGATTGCTACTGGAGAGATAGTAACTCATGCTGATACCTTTGGTTTGGGAATGCATCAACTTCCATATTCTCAAGCTTCGTTCTTCTCATATCAGCCACAACATGGGCCAGGTGAACTTCAGGCCATACAAATGTCACAGTTGCATTCACTTTCATCTAATGTGTCTACTCAAAATCGGCCTCCGTTTGATCTAGCCACTCCATACGATTTGTCAGAAATGTTGTCAAATGATTCTATTGGCCAATTTCGGGGGCTGGACATAGGACACAGGGTTTCTCATGTTCTGATACCTGATGGTCCCTCCATTCCTGTTAATAAAATCAACAATGGCTTTTGA 948 0.4831 MSLPYHRRSQSEVHFRIPDDFDLELDPFDAPPLHFQDPAPNDDLFSAYVDSDKSGSKLQSPPPSATAESSKTGRPGHRRSNSADASSSLLSEGIEAKKAMSPDKLAELWTVDPKRAKRILANRQSAARSKERKACYVLELERKIQTLQTEATTLSAQLNLFQRDTSGLTTENTELKLRLQAMEQQAKLCDALNEALKKEVDRLKIATGEIVTHADTFGLGMHQLPYSQASFFSYQPQHGPGELQAIQMSQLHSLSSNVSTQNRPPFDLATPYDLSEMLSNDSIGQFRGLDIGHRVSHVLIPDGPSIPVNKINNGF 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2797g00026 315 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 112 175 IPR004827 GO:0003700|GO:0006355
Gabi2797g00026 315 Gene3D - 113 166 - -
Gabi2797g00026 315 FunFam probable transcription factor PosF21 113 166 - -
Gabi2797g00026 315 SUPERFAMILY Leucine zipper domain 114 168 IPR046347 GO:0003700|GO:0006355
Gabi2797g00026 315 MobiDBLite consensus disorder prediction 26 89 - -
Gabi2797g00026 315 Pfam bZIP transcription factor 114 171 IPR004827 GO:0003700|GO:0006355
Gabi2797g00026 315 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 5 253 - -
Gabi2797g00026 315 Coils Coil 179 199 - -
Gabi2797g00026 315 CDD bZIP_plant_RF2 115 164 IPR044759 GO:0003700|GO:0006355
Gabi2797g00026 315 SMART brlzneu 110 174 IPR004827 GO:0003700|GO:0006355
Gabi2797g00026 315 MobiDBLite consensus disorder prediction 52 71 - -
Gabi2797g00026 315 Coils Coil 137 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2797g00026 Gabi-Chr2797 267552 271801 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2797g00026 4 291 bZIP Transcription Factor Family AT2G40620 52.484 1.66e-88 267
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gabi2797g00026 bZIP_1 3.4e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2797g00026 - - aprc:113852914 464.536