Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2796g00032 ATGGTTGGCGGTGGAAATGGCGAGAGAGAGCAACCACCGCCGTCGGCGGCGGTGGGGGGACCACCACCGCCACGCAGTTCGATGGAGAGTTATTTCAACGGTGGGTTGAGTCCTGGTCCCATGACTCTGCTTTCGAGCTTCTTTGGCGACAACGATGAGTGCAAGTCTTTCTCTGAGCTCCTCGGCGGCGCCATGGCGGAGCACGGTGAAGGTTCTTCCTTCATGCCCATGTTCACCGGTTTTAGCCCGGGTGGTTTCCACCATTCACCTGCTCAGGGGCACTTTGGAATGACACACCAACAGGCACTAGCACAGGTCACAGCTCAGGCTGTGCAAGCCCCCTCGAATGTGCAAATCCAAGCTGAACATCCATTTTCAGTATCAGTAGTGCCTTCTACCTCATTGACACAGTTTACTGAAGCTACTTCATTGATACCACCCTCAATGCCAGATTCTGGGGCAGCAATGAAAAAATCTCTTGATTATTCTCACTCTGAACATGGACTGCAATCTTCTTCTGTGAATGTTGACAAGCCTAATGACGATGGCTACAATTGGAGGAAGTATGGGCAGAAACAGGTGAAAGGTAGTGAGTTCCCTCGGAGTTATTATAAGTGCACACATCCAAGTTGTTCTGTCAAGAAAAAGGTTGAGCGCTCTCTTGATGGTCATGTAACTGCAATTATTTATAAAGGAGAGCACAATCATCAGCAACCTCATCCCAGCAAGCTCACAAATGAGATCCTATCTTCAAATGAAAATTCTAATATGCAAGGGAATCTTCATTCAACTTATCAATTTCAGGGTAGAGGTTTAAATAGATTGAAAGAAGGGATGAGTTCTCATTCAATGTCTAAGATGGTGGACATTGAATCTAGCCATATAACAGCTGAACGAGTGTCGGGAACAAGTGACAGTGAGGAAGTAGGTGATTATGAAACTGAAGTTGATGAGAAAAATGATGAACCTGACCCCAAGAGGAGAAACACAAAAGTCAGGCTCCAAGATCCAGCCTCTTCACATAGGACTGTCACAGAGCCTAGAATCATTGTGCAAACAACAAGTGAAGTTGATCTCTTAGATGATGGATATAGATGGCGCAAATATGGACAGAAAGTTGTCAAAGGCAACCCTTATCCAAGGAGCTATTACAAATGCACAACCCCAGATTGCAGTGTTCGGAAGCATGTTGAGAGGGCTTCAACGGATCCTAAGGCTGTCATAACAACATATGAAGGAAAACATAATCATGATGTGCCAGCAGCTAAGACTAATAGCCACACTCTTGCCAACAATAGTGCATCACTGCTAAAATCACAAAATGACATATCCGAGAAACATAATTTCAATAGCAGGGTTGTTGGGGGCAATGAGCAGCACCCTGTAGCACATTTAAGGTTGAAGGAAGAACAGATAACCTAG 1422 0.4543 MVGGGNGEREQPPPSAAVGGPPPPRSSMESYFNGGLSPGPMTLLSSFFGDNDECKSFSELLGGAMAEHGEGSSFMPMFTGFSPGGFHHSPAQGHFGMTHQQALAQVTAQAVQAPSNVQIQAEHPFSVSVVPSTSLTQFTEATSLIPPSMPDSGAAMKKSLDYSHSEHGLQSSSVNVDKPNDDGYNWRKYGQKQVKGSEFPRSYYKCTHPSCSVKKKVERSLDGHVTAIIYKGEHNHQQPHPSKLTNEILSSNENSNMQGNLHSTYQFQGRGLNRLKEGMSSHSMSKMVDIESSHITAERVSGTSDSEEVGDYETEVDEKNDEPDPKRRNTKVRLQDPASSHRTVTEPRIIVQTTSEVDLLDDGYRWRKYGQKVVKGNPYPRSYYKCTTPDCSVRKHVERASTDPKAVITTYEGKHNHDVPAAKTNSHTLANNSASLLKSQNDISEKHNFNSRVVGGNEQHPVAHLRLKEEQIT 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2796g00032 473 MobiDBLite consensus disorder prediction 293 343 - -
Gabi2796g00032 473 SUPERFAMILY WRKY DNA-binding domain 179 239 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi2796g00032 473 FunFam WRKY transcription factor 33 347 413 - -
Gabi2796g00032 473 Pfam WRKY DNA -binding domain 181 237 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi2796g00032 473 Pfam WRKY DNA -binding domain 361 417 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi2796g00032 473 MobiDBLite consensus disorder prediction 319 335 - -
Gabi2796g00032 473 Gene3D WRKY domain 166 240 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi2796g00032 473 Gene3D WRKY domain 345 421 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi2796g00032 473 MobiDBLite consensus disorder prediction 1 34 - -
Gabi2796g00032 473 MobiDBLite consensus disorder prediction 165 179 - -
Gabi2796g00032 473 SUPERFAMILY WRKY DNA-binding domain 352 420 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi2796g00032 473 ProSiteProfiles WRKY domain profile. 355 420 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi2796g00032 473 SMART WRKY_cls 180 238 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi2796g00032 473 SMART WRKY_cls 360 419 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi2796g00032 473 FunFam WRKY transcription factor 169 240 - -
Gabi2796g00032 473 ProSiteProfiles WRKY domain profile. 180 239 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi2796g00032 473 MobiDBLite consensus disorder prediction 163 182 - -
Gabi2796g00032 473 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 98 445 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2796g00032 Gabi-Chr2796 304504 307910 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2796g00032 23 473 WRKY Transcription Factor Family AT2G03340 50.286 2.69e-150 436
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gabi2796g00032 WRKY 2.6e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2796g00032 - - gmx:100799335 610.142