Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2796g00029 ATGCGTATGCCAAAGAATGCAACACCATCATCATCTTCATCACCATTGTTACTGTTACCGTCACAAGCTCCACCAATACCACCACCACCACCACGGGATCTGCCGATTGAATTCATGAATCGTATCAGAGAATTGAACGGCACTAACATTAAATTTCTGATGACCAAGACGCTTTTCCACACAGATGTCAGCCCTAGTCACAATCGTCTGTCAATGCCTATTAACGAAATTAGGTGTGATTTCCTCACAGAGGCTGAGAATGGAATGTTGGAGGAAAGAGAAGGCGCTAAAGGAGGACTTGTTGGTGTTGAAGTGACGGTGTTGGATCCATGTCTCAGAGAATATCCTTTGATATTGAAGAAGTGGAAAATGACGAGTTCCAGCATCTACACTCTCATCAAAAACTGGAATATCATTGTTCCTGAAAATAATTTAGAAAAAGGCCATCAAGTCCACATATGGTCTTTTAGAGTTGATGCCAAATTATATTTTGCTTTAAACAAAGTTTGA 510 0.4059 MRMPKNATPSSSSSPLLLLPSQAPPIPPPPPRDLPIEFMNRIRELNGTNIKFLMTKTLFHTDVSPSHNRLSMPINEIRCDFLTEAENGMLEEREGAKGGLVGVEVTVLDPCLREYPLILKKWKMTSSSIYTLIKNWNIIVPENNLEKGHQVHIWSFRVDAKLYFALNKV 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2796g00029 169 Pfam B3 domain-containing protein At2g31720-like 39 140 IPR005508 GO:0003677
Gabi2796g00029 169 CDD B3_DNA 52 168 IPR003340 GO:0003677
Gabi2796g00029 169 MobiDBLite consensus disorder prediction 1 32 - -
Gabi2796g00029 169 SUPERFAMILY DNA-binding pseudobarrel domain 53 165 IPR015300 -
Gabi2796g00029 169 PANTHER B3 DOMAIN PLANT PROTEIN-RELATED 22 169 IPR005508 GO:0003677
Gabi2796g00029 169 Gene3D - 43 168 IPR015300 -
Gabi2796g00029 169 MobiDBLite consensus disorder prediction 1 19 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2796g00029 Gabi-Chr2796 267177 267686 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2796g00029 42 168 B3 DNA Binding Superfamily AT1G05930 31.783 5.36e-15 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2796g00029 - - gmx:102666575 172.555