Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2796g00028 ATGAGCCAGAGGGACAAGAAAACACTTTGGGATTTGATGGCAAATATTTCAGATAGCGAGACACGTCAGAAGATGTCTTGCAAACCCTTTAGGCCTCACTCTTTGGACCTAACACTATCAAGCCTTGCACCACAGTTTTACAATGAAGAAGAATTGGCTCAGATAAAGAGTCTCCATGAACAACTTGATTTGCCACCTGTTAGAACCACAAAGACAGAGAAAGAAAAGGTGACCCCAAATCAAATGCATGAGGACGAAAACGCCACCTCCGTGAATAATAAAAAACCAAGGAAGATGCGTATGCCAAAGAATGCAACACCATCATCATCTTCACCACCATCGTTACTGTTACCGTTACCGCTACTGTTACAGGCTCCACCAATACCACCACCACCACCACCACCACGGGGTCTGCCGATTGAATTCATGAATCGTATCAGAGAATTGAACGGCACTAACATTAAATTTCTGATGACCAAGACGCTTTTCCACACAGATGTCAGCCCTAGTCACAATCGTCTGTCAATGCCTATTAACGAAATTAGGTGTGATTTCCTCACGGAGGCTGAGAATGGAATGTTAGAGGAAAGAGAAGGCGCTAACGGAGGACTTGTTGGTGTTGCAGTGACGGTGTTGGATCCATGTCTCAGAGAATATCCTTTGATATTGAAGAAGTGGAAAATGACGAGTTCCAGCATCTACACTCTCATCAAAAACTGGAATATCATTGTTCCTGAAAATAATTTAGAAAAAGGCCATCAAGTCCACATATGGTCTTTTAGAGTTGATGCCAAATTATATTTTGCTTTAAACAAAGTTTGA 822 0.4209 MSQRDKKTLWDLMANISDSETRQKMSCKPFRPHSLDLTLSSLAPQFYNEEELAQIKSLHEQLDLPPVRTTKTEKEKVTPNQMHEDENATSVNNKKPRKMRMPKNATPSSSSPPSLLLPLPLLLQAPPIPPPPPPPRGLPIEFMNRIRELNGTNIKFLMTKTLFHTDVSPSHNRLSMPINEIRCDFLTEAENGMLEEREGANGGLVGVAVTVLDPCLREYPLILKKWKMTSSSIYTLIKNWNIIVPENNLEKGHQVHIWSFRVDAKLYFALNKV 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2796g00028 273 Pfam B3 domain-containing protein At2g31720-like 143 244 IPR005508 GO:0003677
Gabi2796g00028 273 CDD B3_DNA 156 272 IPR003340 GO:0003677
Gabi2796g00028 273 MobiDBLite consensus disorder prediction 69 114 - -
Gabi2796g00028 273 Gene3D - 147 272 IPR015300 -
Gabi2796g00028 273 MobiDBLite consensus disorder prediction 69 93 - -
Gabi2796g00028 273 SUPERFAMILY DNA-binding pseudobarrel domain 157 269 IPR015300 -
Gabi2796g00028 273 PANTHER B3 DOMAIN PLANT PROTEIN-RELATED 17 273 IPR005508 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2796g00028 Gabi-Chr2796 262862 263683 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2796g00028 146 272 B3 DNA Binding Superfamily AT1G05930 32.558 2.39e-15 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2796g00028 - - gmx:102663703 219.164