Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2794g00044 ATGGGGTGTGTGTTTGGGAAAGAGGCATCAGAGAGAAGGAGGAAAGAGGAAGTGAAAGTTGAAAGAGCAGAAGAGGGTAAGGGTGAGGTTAAGAATGATGGGAATGGGAAGGAGGGTGGAGAGGAAGAGAAGAGGAGGAGGGCAAGGGGGGAGAGGATGCGATCTTCGAAGCCGAATCCAAGGTTAAGCAATCCACCTAACCATGTACATGGTGAGCAAGTGGCTGCAGGTTGGCCCTCTTGGCTCTCCAAGGTTGCTGGGGAAGCTATAAATGGTTTGACCCCTCGAAGGGCAGACACTTTTGAGAAGCTTGATAAGATTGGACAAGGTACATATAGCAATGTTTACAAAGCTAGGGATACTTTAACAGGGAAAATTGTTGCCCTAAAGAAGGTCCGCTTTGACAATCTGGAGCCTGAGAGTGTGAAATTTATGGCCAGAGAGATTCTGATTCTGCGTCGTCTGGATCATCCCAATGTTCTCAAACTGGAAGGTTTAGTGACTTCTAGAATGTCATGCAGTTTGTATCTTGTGTTTGAATACATGGAGCATGACTTGGCTGGACTTGCAACAAGCCCAACAATCAAGTTTACCGAGTCTCAGGTTAAATGTTACATGCATCAGCTATTTTCTGGACTGGAACACTGTCACAACCGTCATGTGTTGCATCGTGATATAAAGGGGTCAAATCTTCTTATTGACAATGAAGGAATCCTTAGGATTGCTGATTTTGGATTAGCTTCCTTCTTCGATCCTAATCACAAGCACCCAATGACCAGCAGGGTGGTTACTTTATGGTATCGACCTCCAGAACTTCTTCTGGGAGCCACTGATTATGGTGTTGGAGTGGACCTCTGGAGTGCTGGCTGCATTCTTGCTGAATTGTTGGCTGGAAAGCCTATTATGCCTGGTCGAACGGAGGTGGAGCAGCTACATAAGATATTTAAGCTATGTGGGTCTCCTTCTGAAGAATATTGGAAAAAGTCGAAGTTGCCGCATGCTACCATTTTTAAGCCCCAACAATCATACAAGCGGTGCATAGCAGAGACATTTAAAGATTTCCCATCATCATCTATGCCCCTAATTGAGACCCTTCTCGCAATTGATCCAGCTGAACGTCAAACTGCCACTGCTGCATTGCATAGTGAATTCTTTACAACAAGACCTTATGCTTGTGAGCCCTCTAGCCTTCCAAAATATCCTCCAAGCAAAGAGATGGATGCAAGGCTACGGGATGAAGAAGCTAGAAGATTGAGAGCTGCTCGTAAAGTTAATGTTGATGGTGTCAAAAAATCTCGACCACGTGATCGAGGTGGAAGGGGAATTCCAGTTCCAGACGCCAATGCTGAGCTGCAAGCAAATATTGATAGATGGCGACTGATAACACATGCAAATGCCAAGAGCAAGAGTGAGAAGTTTCCTCCTCCCCACCAAGATGGAACTCTAGGCTATCCTTTGGGTTCTTCTCAACACATGGATCCAGCTTTTGATCCTCCTGATGTTCCATTTAGTTCCACTAACTTCTCACAGACAAAAGCAAATATCCAAACCTGGTCTGGCCCCTTGGTGGAACCTAGTGTGGGTGCTCCCAAGAGAAAGAAGAACATGGCACGTGATGGACATATACACTCCAAGTCATCCAAGAAAGACTCAAATAGGTAG 1662 0.4549 MGCVFGKEASERRRKEEVKVERAEEGKGEVKNDGNGKEGGEEEKRRRARGERMRSSKPNPRLSNPPNHVHGEQVAAGWPSWLSKVAGEAINGLTPRRADTFEKLDKIGQGTYSNVYKARDTLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVLKLEGLVTSRMSCSLYLVFEYMEHDLAGLATSPTIKFTESQVKCYMHQLFSGLEHCHNRHVLHRDIKGSNLLIDNEGILRIADFGLASFFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATIFKPQQSYKRCIAETFKDFPSSSMPLIETLLAIDPAERQTATAALHSEFFTTRPYACEPSSLPKYPPSKEMDARLRDEEARRLRAARKVNVDGVKKSRPRDRGGRGIPVPDANAELQANIDRWRLITHANAKSKSEKFPPPHQDGTLGYPLGSSQHMDPAFDPPDVPFSSTNFSQTKANIQTWSGPLVEPSVGAPKRKKNMARDGHIHSKSSKKDSNR 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2794g00044 553 MobiDBLite consensus disorder prediction 426 448 - -
Gabi2794g00044 553 SMART serkin_6 101 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2794g00044 553 FunFam probable serine/threonine-protein kinase At1g54610 88 183 - -
Gabi2794g00044 553 MobiDBLite consensus disorder prediction 466 553 - -
Gabi2794g00044 553 FunFam probable serine/threonine-protein kinase At1g54610 184 425 - -
Gabi2794g00044 553 ProSitePatterns Protein kinases ATP-binding region signature. 107 130 IPR017441 GO:0005524
Gabi2794g00044 553 ProSiteProfiles Protein kinase domain profile. 101 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2794g00044 553 MobiDBLite consensus disorder prediction 502 521 - -
Gabi2794g00044 553 SUPERFAMILY Protein kinase-like (PK-like) 96 390 IPR011009 -
Gabi2794g00044 553 Gene3D Transferase(Phosphotransferase) domain 1 184 425 - -
Gabi2794g00044 553 ProSitePatterns Serine/Threonine protein kinases active-site signature. 221 233 IPR008271 GO:0004672|GO:0006468
Gabi2794g00044 553 MobiDBLite consensus disorder prediction 1 72 - -
Gabi2794g00044 553 PANTHER CELL DIVISION PROTEIN KINASE 99 389 - -
Gabi2794g00044 553 MobiDBLite consensus disorder prediction 7 56 - -
Gabi2794g00044 553 MobiDBLite consensus disorder prediction 531 553 - -
Gabi2794g00044 553 Pfam Protein kinase domain 101 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2794g00044 553 MobiDBLite consensus disorder prediction 426 440 - -
Gabi2794g00044 553 CDD STKc_CDK9_like 101 385 - -
Gabi2794g00044 553 Gene3D Phosphorylase Kinase; domain 1 89 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2794g00044 Gabi-Chr2794 315039 319921 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2794g00044 96 423 Core Cell Cycle Gene Families AT5G10270 51.163 9.24e-116 350
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Gabi2794g00044 Pkinase 8.4e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2794g00044 K08819 - qsa:O6P43_003509 937.562