Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2794g00034 ATGGACTGCAATAAAGAAGAGGCCTTAAGGGCCAAGGACATTGCTGAAAAGAAGATGGAAAGAAGAGATTTCATGGGGGCACGTAAAATTGCTCTTAAGGCTCAGCAGCTGTATCCTGATCTGGAAAATATAGCTCAAATGCTTTTTGTTTGTGATGTGCATTGCTCTGCTGAGCTGAAATTGTTTGGTAATGAGATGGACTGGTACAGAATTCTGCAACTTGAACAGACTGCTAACGATCTTATGATCAAGAAGCAATACAAGAAGTTTGCTCTCCAACTGCATCCCGACAAAAACAAGTTTTCTGGTGCAGAAGCTGCATTTAAGCTGATTGGTGAAGCTCAAAGAGTGCTTTTGGACAAAGATAAACGAACTATCCATGACATGAAGCGTAGGGTTCCAATGAACAAAACTGCCACGTCACGTCATAGTCAGCAGAAGGCTCCTATGAATTTTAATTCTGCGGTGAAAACCAATGTAAAGCCCAGTTTTACGAACTTGAATGCTCAGCAGCAGCAGCAGCAATCTAGGACGCCAGTGCAGCAAAGGCACAACTATAGCCGCCCTACTTTTTGGACTGTCTGCCCTTTTTGTTCTGTTAAATATCAGTATTATAGAGAAGTTTTAAATAAACCTCTCCGTTGTCAGCAGTGCAATAGGCCCTTCATTGCTTATGATGTGGATATGCAAAATACATCACCAGCAACTAATTCAAGTCAGAAAGCTTTTGGCCATCATTTGAATCATGATGCTTTCAAGATGGGTGCTGGATTTCAAGGAAATCTGCATGCTGAGAAGTCCAATACAGAGCCTTATGACAATAAAGGCACTACTGATGTCTCTAGGAAGCCAAATGGAAAGAGAAAGAGTAACCAGGTGGCGGAATCTAGTGAAAGTTCTGATTCTACAGGTAGCACGGATTCTGAAGATAATATGGTTGCTGGCGAGGATGGTTTTCCTGGTGTAGAAGACCATTCAACTTATAGAGAAGAGCATCCACGGAGATCTACACGTCAAAAACATCAAGTTTCCTATGAGGAGAATGCAAGTGACAATGATGAGGTAAAACGGAATCATCTGTATTCTGAAGAGAACTTATTAAATAGAAACAAGGAAACTAAAAAAGTGAGGGGAAAAGAAGCAGTGGGAGACTCAAAGCATGTGGATGAAACATCCGAGCATCCTTCTCCTTATTCAGTCTCCAAAGCAGCAAATCATCCAAATATTTATGTCTATCCTGATGCAGAGTTCAGTGACTTTGGCAAGGATAGGAAAAAAGAATGTTTTGCTGCTGGGCAGACTTGGGCTATTTATGATACAGCGGAGGGCATGCCTAGATTCTATGCTTTAATCAGAAAAGTTCTCTCTCCTGGATTTAAGCTGCGGATAACATGGTTTGAACCAAGTCCAGATGACGATGATGAAATCAACTGGGTAAATGAGGAATTGCCTGTTGCTTGTGGGAAATATAAACTTGGTGGCACTGACACCACTGAAGATTATCTGATGTTCTCTCATCTGATTTTGAGTGAAAAGATTGGGCGCAATACTTTTAAAGTGTATCCTAAAAAAGGAGAAACTTGGGCTCTTTTTAAAAATTGGGATATCAAATGGCACATGGATGTGGAATCTCATCAGCAGTATGAATATGAGTTTGTTGAAGTCTTGTCGGATTATGTCGAAGGTGAGGGTGTATCTGTTGCATACTTGGCTAAGTTGAAAGGTTTTGTATGTCTTTTTTCTCAAATTACTATGGAAGATAACCAATCATTTCAAATTCCACCAGTGGAGTTATTTAGATTCTCTCACAGGGTTCCATCTTTCAAAATGACTGGTGAGGAAGGAGTAGGCGTTCATATAGGATCTTATGAACTTGATCCTGCAGCTTTGCCGACGAATATTGAAGAGATTGCTGTTCCTGAAAATTTGGATGTGAAGGCTGGACATAGTTCAAAACCACTGATGACATCTGAGGGAGATGATGTATCTATTTCTAAGGTTGATGTGGAAAGAAGCAATTTGGCAGATGAGGTCAAGGACTCCATTGATGACATTGATGATGGTCATGCTCCTCCAGCTTCGGCCCCAGAAGATATCGAAATACCAGCAGCTTCGACCCCAGAAGATATTGAAATTCCAGAACCTCAGTTCTTCAATTTTGATGCTGGGAGGTCCCTTGAAAAGTTTCAGATTGGTCAGATTTGGGCATTTTACAGTGATGAGGATGGACTGCCAAAATACTATGGTCAGGTTAATGTGATTAAAACTAGTCCAGTTCTTGAATTGCGTGTTTATTGGCTTAATTGCTGCGGGCTACCAGAGAATACCACTGAATGGGAAGACAAAGACATGCTTATTTCCTGTGGCAGATTTAAAGTTAGTAAAACAGTTGCAAATGCCAGCATTTATAGGAACACCTCTTGTGTTTCCCATCAGGTGCATGCTGATGCTGTTGGTAAGAATAAGAATTATTATGCCATTTTTCCAAGGAAAGGTGAAGTTTGGGCATTATATAGAAATTGGTCAAGTAAAATAAAATATTCTGACTTGAAAAATTGGGAGTATGACATAGTGGAAGTTCTTGAAGAAACTGATTTGTTTATGGATGTTTTAGTTTTGGAGTTTGTTAGTGGTTTTAGTTCAGTTTTCAGGGCTAAATCAAATGATGGATCAGCTGTCAACCTGAGAATACCCAGAAAAGAGTTGCTTAGGTTCTCGCACCAAATCCCAGCTTTCAAACTGACAGAAGAGCATGGCAGCAATCTGAGAGGCTTCTGGGAACTTGATCCAGGTGCGCTGCCAATTCATTATTATGGCTCGAGATGA 2826 0.4055 MDCNKEEALRAKDIAEKKMERRDFMGARKIALKAQQLYPDLENIAQMLFVCDVHCSAELKLFGNEMDWYRILQLEQTANDLMIKKQYKKFALQLHPDKNKFSGAEAAFKLIGEAQRVLLDKDKRTIHDMKRRVPMNKTATSRHSQQKAPMNFNSAVKTNVKPSFTNLNAQQQQQQSRTPVQQRHNYSRPTFWTVCPFCSVKYQYYREVLNKPLRCQQCNRPFIAYDVDMQNTSPATNSSQKAFGHHLNHDAFKMGAGFQGNLHAEKSNTEPYDNKGTTDVSRKPNGKRKSNQVAESSESSDSTGSTDSEDNMVAGEDGFPGVEDHSTYREEHPRRSTRQKHQVSYEENASDNDEVKRNHLYSEENLLNRNKETKKVRGKEAVGDSKHVDETSEHPSPYSVSKAANHPNIYVYPDAEFSDFGKDRKKECFAAGQTWAIYDTAEGMPRFYALIRKVLSPGFKLRITWFEPSPDDDDEINWVNEELPVACGKYKLGGTDTTEDYLMFSHLILSEKIGRNTFKVYPKKGETWALFKNWDIKWHMDVESHQQYEYEFVEVLSDYVEGEGVSVAYLAKLKGFVCLFSQITMEDNQSFQIPPVELFRFSHRVPSFKMTGEEGVGVHIGSYELDPAALPTNIEEIAVPENLDVKAGHSSKPLMTSEGDDVSISKVDVERSNLADEVKDSIDDIDDGHAPPASAPEDIEIPAASTPEDIEIPEPQFFNFDAGRSLEKFQIGQIWAFYSDEDGLPKYYGQVNVIKTSPVLELRVYWLNCCGLPENTTEWEDKDMLISCGRFKVSKTVANASIYRNTSCVSHQVHADAVGKNKNYYAIFPRKGEVWALYRNWSSKIKYSDLKNWEYDIVEVLEETDLFMDVLVLEFVSGFSSVFRAKSNDGSAVNLRIPRKELLRFSHQIPAFKLTEEHGSNLRGFWELDPGALPIHYYGSR 941
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2794g00034 941 SUPERFAMILY Chaperone J-domain 62 133 IPR036869 -
Gabi2794g00034 941 Pfam Domain of unknown function (DUF3444) 708 917 IPR024593 -
Gabi2794g00034 941 Pfam Domain of unknown function (DUF3444) 408 614 IPR024593 -
Gabi2794g00034 941 MobiDBLite consensus disorder prediction 677 693 - -
Gabi2794g00034 941 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Gabi2794g00034 941 SMART dnaj_3 66 123 IPR001623 -
Gabi2794g00034 941 MobiDBLite consensus disorder prediction 268 289 - -
Gabi2794g00034 941 PRINTS DnaJ domain signature 87 102 IPR001623 -
Gabi2794g00034 941 PRINTS DnaJ domain signature 69 87 IPR001623 -
Gabi2794g00034 941 PRINTS DnaJ domain signature 103 123 IPR001623 -
Gabi2794g00034 941 CDD DnaJ 67 120 IPR001623 -
Gabi2794g00034 941 MobiDBLite consensus disorder prediction 290 310 - -
Gabi2794g00034 941 MobiDBLite consensus disorder prediction 322 393 - -
Gabi2794g00034 941 Gene3D DnaJ domain 64 179 IPR036869 -
Gabi2794g00034 941 MobiDBLite consensus disorder prediction 262 403 - -
Gabi2794g00034 941 Pfam DnaJ domain 67 128 IPR001623 -
Gabi2794g00034 941 MobiDBLite consensus disorder prediction 677 699 - -
Gabi2794g00034 941 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN-RELATED 1 934 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2794g00034 Gabi-Chr2794 211269 215705 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2794g00034 4 227 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 34.783 1.01e-27 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2794g00034 - - gmx:100795200 1339.71