Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2794g00011 ATGGGTTGTGTCCATGGCAAGTATTGCTGCGGCAAATTTTCTTCATCAGAGTGTGGCCATCGGAAGAACGCACGCGCTCAGAGATCACTTGAGTATGTTCCTGTTCCTTCCCACAACTTCACTTTGGAATACTCTTTTCTCACACGACGGGGATACTACCCTGACTCGCCGGATAAAGAAAACCAAGATTGTTTCTGCATTAGGACACAAATCCAAGGTAACCCCAGTATCCATTTATTTGGTGTCTATGATGGGCACGGTCAATTTGGTGGCCAGTGTTCGAACTTTGTTAAGGATAGGTTGGTAGAAAAATTATCAAATGACCCTGCATTGTTGGAGGACCCTGTTCAATCTTACACTTCTGCATTCTTGACTACAAATCAAGAATTGCATGCTAGTCAAATTGATGATTCTATGAGTGGAACCACCGCAATTACGGTGCTTGTTATTGGAGACACCCTTTATGTTGCTAATGTTGGTGATTCGAGAGCTGTGCTAGCTGTTAAGGATGGGAATCGCATTATTGCTGAGGACTTGTCCTCTGATCAGACACCATATCGGAGAGATGAATATGAGAGAGTGAAACTTTGTGGGGCAAGGGTGTTGAGTGTTGATCAAGTGGAAGGGCTCAAGGATCCGGATATTCAGAATTGGGGTGATGAAGAGAGTCGGGGTTGTGATCCTCCGAGATTGTGGGTTCGAAATGGGATGTATCCTGGAACTGCATTTACCAGGAGTATAGGGGATGATTTGGCGGAGACTATTGGTGTCATTGCTATTCCAGAGGTGTCAAAAGTTCAGCTTACACCTAATCATCTTTTCTTTATTGTTGCAAGTGATGGCGTGTTTGAATTCATGTCAAGCCAAATGGTTGTTGATATGGCAGCCAGCTATACAGATCCTCGTGATGCATGTGCGGCCATTGCTGGAGAGTCACATAAACTATGGTTGGAACATGAGAACCGAACAGATGATATAACAATTATCATTGTTCAGATCAAAGGCTTCTCTAATGTATGGATTCTTGAATATATTCCTTTGGTGCCACTTGCTTTTTATGTTTTCTACATTCACACTTGTTTAAAGATTTTAAATTTGTAG 1101 0.426 MGCVHGKYCCGKFSSSECGHRKNARAQRSLEYVPVPSHNFTLEYSFLTRRGYYPDSPDKENQDCFCIRTQIQGNPSIHLFGVYDGHGQFGGQCSNFVKDRLVEKLSNDPALLEDPVQSYTSAFLTTNQELHASQIDDSMSGTTAITVLVIGDTLYVANVGDSRAVLAVKDGNRIIAEDLSSDQTPYRRDEYERVKLCGARVLSVDQVEGLKDPDIQNWGDEESRGCDPPRLWVRNGMYPGTAFTRSIGDDLAETIGVIAIPEVSKVQLTPNHLFFIVASDGVFEFMSSQMVVDMAASYTDPRDACAAIAGESHKLWLEHENRTDDITIIIVQIKGFSNVWILEYIPLVPLAFYVFYIHTCLKILNL 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2794g00011 366 ProSitePatterns PPM-type phosphatase domain signature. 79 87 IPR000222 GO:0043169
Gabi2794g00011 366 CDD PP2Cc 49 333 IPR001932 -
Gabi2794g00011 366 ProSiteProfiles PPM-type phosphatase domain profile. 43 333 IPR001932 -
Gabi2794g00011 366 PANTHER PROTEIN PHOSPHATASE 59 332 IPR015655 GO:0004722|GO:0006470
Gabi2794g00011 366 Gene3D - 36 335 IPR036457 -
Gabi2794g00011 366 SMART PP2C_4 27 331 IPR001932 -
Gabi2794g00011 366 FunFam Phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein 38 335 - -
Gabi2794g00011 366 Pfam Protein phosphatase 2C 67 307 IPR001932 -
Gabi2794g00011 366 SUPERFAMILY PP2C-like 31 335 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2794g00011 Gabi-Chr2794 71105 74426 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2794g00011 1 338 PP2C-type Phosphatase Gene Family AT3G06270 69.828 1.37e-179 500
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2794g00011 - - gmx:100797866 584.719