Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2793g00017 ATGGCAGATGAAGCACAAAATGATCTGAAGGAGGAGGTCACCGAGATTGCACCCTTTGATCCTACAAAGAAGAAGAAGAAAAAGAAAGCCACAATTGTGGATCCAGCTGATGATTCAGTGGACAAGTTGGCAGAGAAGACAGAAAATCTGTCTGTCTCTGATGGAGTTGAGAGTTCATTTTCTGGTTTAAAAAAGAAGAAGAAGAAGCCTGTTGAAATCAGTAACTTAAACGATGAGGGTGAAGATGCAATTGAAGATTTGGATGATCATGCTGAAGAAGATGAAGGAGATGACATTTCCTTGCAGCCCCGTTATCCTTGGGAAGGGAGTGACCGTGATTTTGAATATGAGGAGCTTCTTGGCAGAGTGTTTAACATTCTACGCGAGAATAATCCAGAACTTGCCGGAGACCGTCGGAGGACTGTTATGAGGCCTCCACAAGTTCTACGGGAGGGCACAAAGAAAACTGTTTTTGTGAATTTTATGGATTTATGCAAAACGATGCATCGGCAGCCAGACCATGTCATGGCTTTCTTGCTTGCTGAACTGGGTACAAGTGGCTCTCTAGATGGACAACAGAGATTGGTTGTGAAGGGAAGATTTGCACCAAAGAACTTTGAAGGAATTCTGCGACGATATATCAATGAGTATGTCATTTGCATTGGATGCAAAAGTCCCGACACAATCCTTTCTAAGGAGAACCGTTTATTCTTTCTTCGATGTGAAAAGTGTGGATCAGGAAGATCAGTTGCTCCAATCAAGGCTGGTTTTGTTGCTCGTGTTGGCCGTAGGAATGCGGGGACATGA 807 0.4349 MADEAQNDLKEEVTEIAPFDPTKKKKKKKATIVDPADDSVDKLAEKTENLSVSDGVESSFSGLKKKKKKPVEISNLNDEGEDAIEDLDDHAEEDEGDDISLQPRYPWEGSDRDFEYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYINEYVICIGCKSPDTILSKENRLFFLRCEKCGSGRSVAPIKAGFVARVGRRNAGT 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2793g00017 268 Coils Coil 73 93 - -
Gabi2793g00017 268 SMART eIF2Bneu4 138 247 IPR002735 GO:0003743|GO:0006413
Gabi2793g00017 268 MobiDBLite consensus disorder prediction 1 37 - -
Gabi2793g00017 268 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 117 267 IPR045196 GO:0003743|GO:0006413
Gabi2793g00017 268 SUPERFAMILY Zinc-binding domain of translation initiation factor 2 beta 217 252 IPR016190 GO:0003743|GO:0006413
Gabi2793g00017 268 Gene3D - 111 253 - -
Gabi2793g00017 268 MobiDBLite consensus disorder prediction 1 22 - -
Gabi2793g00017 268 Pfam Domain found in IF2B/IF5 137 246 IPR002735 GO:0003743|GO:0006413
Gabi2793g00017 268 SUPERFAMILY Translation initiation factor 2 beta, aIF2beta, N-terminal domain 114 220 IPR016189 GO:0003743|GO:0006413
Gabi2793g00017 268 MobiDBLite consensus disorder prediction 50 82 - -
Gabi2793g00017 268 MobiDBLite consensus disorder prediction 60 76 - -
Gabi2793g00017 268 FunFam Eukaryotic translation initiation factor 2 subunit 111 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2793g00017 Gabi-Chr2793 255136 261367 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2793g00017 1 264 Eukaryotic Initiation Factors Gene Family AT5G20920 77.528 1.69e-139 391
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2793g00017 K03238 - gmx:100783618 479.174