Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2793g00006 ATGAAGAAGAAAGGTGTTGACGAGTTCCCATTCTGCGTGCACTTGGTGTCATGGGAGAAAGAGAACGTTTCGAGCGAAGCTTTGGAAGCAGCAAGGATAGCGTGCAACAAGTACATGGTTCTTCTTTCTGTTCGTTGTAAGGATACTAATAGCCACCATGCTCACGAGGCTCTTCGCCGTGCCAAATTTAAGTTCCCTGGTCGCCAGAAGATTATTGTCAGCAGAAAGTGGGGATTTACTAAGTTCAACCGAACTGACTATTTGAAGTTGAAGTCTGAGAACAGAATTGTGCCGGATGGTGTCAATGCCAAGGTTCTTGGGTGCCATGGCCCTTTGGCCAATCGTCAGCCTGGAAGAGCTTTCTTGCGAGCTACTGCTTAG 381 0.4751 MKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMVLLSVRCKDTNSHHAHEALRRAKFKFPGRQKIIVSRKWGFTKFNRTDYLKLKSENRIVPDGVNAKVLGCHGPLANRQPGRAFLRATA 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2793g00006 126 CDD Ribosomal_L16_L10e 4 72 IPR016180 GO:0003735|GO:0005840|GO:0006412
Gabi2793g00006 126 FunFam 60S ribosomal protein L10, putative 81 122 - -
Gabi2793g00006 126 Gene3D Ribosomal protein L10e/L16 41 84 IPR036920 GO:0003735|GO:0005840|GO:0006412
Gabi2793g00006 126 PANTHER 60S RIBOSOMAL PROTEIN L10 1 40 IPR001197 GO:0003735|GO:0005840|GO:0006412
Gabi2793g00006 126 SUPERFAMILY Ribosomal protein L16p/L10e 2 79 IPR036920 GO:0003735|GO:0005840|GO:0006412
Gabi2793g00006 126 Gene3D Ribosomal protein L10e/L16 1 40 IPR036920 GO:0003735|GO:0005840|GO:0006412
Gabi2793g00006 126 Gene3D - 85 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2793g00006 Gabi-Chr2793 73202 74817 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2793g00006 1 124 Cytoplasmic Ribosomal Protein Gene Family AT1G14320 87.097 4.69e-80 229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2793g00006 K02866 - osa:107277419 197.978