Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2791g00032 ATGCAGCAGACAACAATGGCAGCGGATTCGCAAAAGATTGAACAGGTTCAGTGCTTCGGGCGGAAGAAGACGGCGGTGGCCGTCACCTACTGCAAGCGAGGGCGCGGTCTGATCAAGATCAACGGTTGTCCCATCGAGCTGGTTGAACCGGAGATCCTCCGGTTCAAGGCGTTCGAGCCGATCCTCCTCTTGGGGAAGAGCAGGTTCGCCGGCGTGGACATGAGGATCCGCGTCAAGGGCGGCGGTCACACCTCTCAGATTTACGCCATACGGCAGAGCATAGCGAAGGCACTCGTGGCGTTCTACCAGAAGTACGTCGATGAACAGAGCAAGAAGGAGATCAAGGACATCCTTGTCAGGTATGATCGTACCTTGCTTGTCGCTGATCCCAGGCGCTGTGAGCCCAAGAAGTTCGGTGGTCGTGGTGCTCGCGCTAGGTTCCAGAAGTCCTACCGTTGA 459 0.5708 MQQTTMAADSQKIEQVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAFEPILLLGKSRFAGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2791g00032 152 Gene3D - 6 152 IPR014721 -
Gabi2791g00032 152 FunFam 40S ribosomal protein S16 8 152 - -
Gabi2791g00032 152 PANTHER RIBOSOMAL PROTEIN S9 9 149 IPR000754 GO:0003735|GO:0005840|GO:0006412
Gabi2791g00032 152 SUPERFAMILY Ribosomal protein S5 domain 2-like 15 152 IPR020568 -
Gabi2791g00032 152 Pfam Ribosomal protein S9/S16 20 152 IPR000754 GO:0003735|GO:0005840|GO:0006412
Gabi2791g00032 152 ProSitePatterns Ribosomal protein S9 signature. 80 98 IPR020574 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2791g00032 Gabi-Chr2791 306416 307116 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2791g00032 8 152 Cytoplasmic Ribosomal Protein Gene Family AT2G09990 86.897 2.06e-92 263
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2791g00032 K02960 - gmx:100779794 280.411