Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2791g00031 ATGCAGCAGACAACAATGGCAGCGGATTCGCAAAAGATTGAACAGGTTCAGTGCTTCGGGCGGAAGAAGACGGCGGTGGCCGTCACCTACTGCAAGCGAGGGCGCGGTCTGATCAAGATCAACGGTTGTCCCATCGAGCTGGTTGAACCGGAGATCCTCCGGTTCAAGGCGTTCGAGCCGATCCTCCTCTTGGGGAAGAGCAGGTTCGCCGGCGTGGACATGAGGATCCGCGTCAAGGGCGGCGGTCACACCTCTCAGATTTACGCCATACGGCAGAGCATAGCGAAGGCACTCGTGGCGTTCTACCAGAAGTACGTCGATGAACAGAGCAAGAAGGAGATCAAGGACATCCTTGTCAGGTATGATCGTACCTTGCTTGTCGCTGATCCCAGGCGCTGTGAGCATTGGCAGTTTTATAATTTTTGCCTTATTTTAAATACGGGATCTTTTGCTATTTTAATCGAACTTGTTGTTTTAGTTCAAATGCAATTATGCGAGTATAACATAAATCTAGTTTATTTTTGCATTAAATGTAGAAACTTTTGTTATGCCTGCTGTTAA 561 0.4848 MQQTTMAADSQKIEQVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAFEPILLLGKSRFAGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEHWQFYNFCLILNTGSFAILIELVVLVQMQLCEYNINLVYFCIKCRNFCYACC 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2791g00031 186 FunFam 40S ribosomal protein S16 8 141 - -
Gabi2791g00031 186 Pfam Ribosomal protein S9/S16 20 135 IPR000754 GO:0003735|GO:0005840|GO:0006412
Gabi2791g00031 186 SUPERFAMILY Ribosomal protein S5 domain 2-like 15 135 IPR020568 -
Gabi2791g00031 186 Gene3D - 6 139 IPR014721 -
Gabi2791g00031 186 PANTHER RIBOSOMAL PROTEIN S9 9 135 IPR000754 GO:0003735|GO:0005840|GO:0006412
Gabi2791g00031 186 ProSitePatterns Ribosomal protein S9 signature. 80 98 IPR020574 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2791g00031 Gabi-Chr2791 306323 307116 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2791g00031 8 138 Cytoplasmic Ribosomal Protein Gene Family AT2G09990 84.733 6.80e-79 230
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2791g00031 K02960 - gmx:100812117 244.202