LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gabi2787g00001	ATGGAATCCAAACCCGGCCACAACACTATCAAACTCCTCTGTAGCTACGGCGGCAAGATCCTCCCTCGCGCCACTGACGGTGAACTCCGTTACGTCGGCGGCCACACCAGAGTACTCACCGTCGATCGTTCCGTTTCCTTTTCAGAATTGATGGTGAAACTTGGTGAATTGAGCGGTTCGTCTGTGACCTTGAGGTGTCAGTTACCCAAGGGAGACTTGGAGACCTTGATCTCCGTCACCAGCGACGCAGATTTGGCCAACATAATCGAAGAATACGATCGTGCCTCGTCGAAATTAGCTCATCCGTTGAAGATTAGAGCCATTCTTTCGCCGCCGAAATCGCTCAAGAAGGTGTCTCCTACTCCATCGTCGGCTTCGTCCTGCGCCAGTCACTCTCCGTCCAGATCTCCCCACACCTCCGCTGAATCGCTGCCGTACGCGGTGGCGTATCGCGTCGGTCGCCACCGTCGCTCACCGCCGGCGACGGTTGTGTATCCGATCGATGTCCGTAATGGCTCAGCGAAAGCTTGTTGCTACACGGGCCAGTTCAAGGGAAACTCTAGGTTCCTGTATTGTGAACCTCACTGCAACAATTACTGCCATTGA	606	0.5446	MESKPGHNTIKLLCSYGGKILPRATDGELRYVGGHTRVLTVDRSVSFSELMVKLGELSGSSVTLRCQLPKGDLETLISVTSDADLANIIEEYDRASSKLAHPLKIRAILSPPKSLKKVSPTPSSASSCASHSPSRSPHTSAESLPYAVAYRVGRHRRSPPATVVYPIDVRNGSAKACCYTGQFKGNSRFLYCEPHCNNYCH	201

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gabi2787g00001	201	Pfam	PB1 domain	28	98	IPR000270	GO:0005515
	Gabi2787g00001	201	SUPERFAMILY	CAD & PB1 domains	26	117	-	-
	Gabi2787g00001	201	MobiDBLite	consensus disorder prediction	116	141	-	-
	Gabi2787g00001	201	CDD	PB1_UP2	13	109	-	-
	Gabi2787g00001	201	SMART	PB1_new	24	112	IPR000270	GO:0005515
	Gabi2787g00001	201	MobiDBLite	consensus disorder prediction	113	141	-	-
	Gabi2787g00001	201	PANTHER	OS05G0427100 PROTEIN-RELATED	8	134	-	-
	Gabi2787g00001	201	Gene3D	-	30	108	-	-

Showing 1 to 8 of 8 entries

Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Gabi2787g00001	Gabi-Chr2787	19855	21984	Dispersed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gabi2787g00001	8	91	MAP Kinase Kinase Kinase	AT2G35050	50.000	9.95e-25	99.4

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gabi2787g00001	-		-	vra:106761207	286.96

Showing 1 to 1 of 1 entries