Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2787g00001 ATGGAATCCAAACCCGGCCACAACACTATCAAACTCCTCTGTAGCTACGGCGGCAAGATCCTCCCTCGCGCCACTGACGGTGAACTCCGTTACGTCGGCGGCCACACCAGAGTACTCACCGTCGATCGTTCCGTTTCCTTTTCAGAATTGATGGTGAAACTTGGTGAATTGAGCGGTTCGTCTGTGACCTTGAGGTGTCAGTTACCCAAGGGAGACTTGGAGACCTTGATCTCCGTCACCAGCGACGCAGATTTGGCCAACATAATCGAAGAATACGATCGTGCCTCGTCGAAATTAGCTCATCCGTTGAAGATTAGAGCCATTCTTTCGCCGCCGAAATCGCTCAAGAAGGTGTCTCCTACTCCATCGTCGGCTTCGTCCTGCGCCAGTCACTCTCCGTCCAGATCTCCCCACACCTCCGCTGAATCGCTGCCGTACGCGGTGGCGTATCGCGTCGGTCGCCACCGTCGCTCACCGCCGGCGACGGTTGTGTATCCGATCGATGTCCGTAATGGCTCAGCGAAAGCTTGTTGCTACACGGGCCAGTTCAAGGGAAACTCTAGGTTCCTGTATTGTGAACCTCACTGCAACAATTACTGCCATTGA 606 0.5446 MESKPGHNTIKLLCSYGGKILPRATDGELRYVGGHTRVLTVDRSVSFSELMVKLGELSGSSVTLRCQLPKGDLETLISVTSDADLANIIEEYDRASSKLAHPLKIRAILSPPKSLKKVSPTPSSASSCASHSPSRSPHTSAESLPYAVAYRVGRHRRSPPATVVYPIDVRNGSAKACCYTGQFKGNSRFLYCEPHCNNYCH 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2787g00001 201 Pfam PB1 domain 28 98 IPR000270 GO:0005515
Gabi2787g00001 201 SUPERFAMILY CAD & PB1 domains 26 117 - -
Gabi2787g00001 201 MobiDBLite consensus disorder prediction 116 141 - -
Gabi2787g00001 201 CDD PB1_UP2 13 109 - -
Gabi2787g00001 201 SMART PB1_new 24 112 IPR000270 GO:0005515
Gabi2787g00001 201 MobiDBLite consensus disorder prediction 113 141 - -
Gabi2787g00001 201 PANTHER OS05G0427100 PROTEIN-RELATED 8 134 - -
Gabi2787g00001 201 Gene3D - 30 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2787g00001 Gabi-Chr2787 19855 21984 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2787g00001 8 91 MAP Kinase Kinase Kinase AT2G35050 50.000 9.95e-25 99.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2787g00001 - - vra:106761207 286.96