Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2779g00018 ATGGCAACCCCTTCCTCACCGAAACTAATTTCCCCAATCGCCACAAACGACGACGCTTCACCCCCGAAGAGACCCCAATCGATCCCATGGACCCACCAAGAGACGGTGAACCTCATCAGGTCTTACCAAGAGAAATGGTATTCCCTCAAGCGGGGCCCACTCCGGTCCACCCAGTGGGAAGAGGTCGCCGTCGTCGTCGCCGCCCGATGCGGCTACGACTCCAATCACGCTTCCAAGTCCGCCATCCAATGCCGCCACAAGATGGAGAAGCTCCGCCAGCGCCATCGCGCCGAGAAGCACCGCCTTTCCACCGGCGCCGCCATGGCCCGCGGCGGCGCCTGGCAATACTCCGGCCTCATGGACGAGTTGGAACGCGGTCCTCTTCCTATTTCGGCTCGACCTTTCATGTCTATGGCTCCTTTAGGTTACAACAACGAGAATGATCATGATGAAGATGATGAAGATAATGATGATGATGATGATGATGATGGTGTTTGCTACTACAATGATGATGATGACCAGAGGGAGAGTTATATCAAGTCTAAGAGTATTAATTACATTGTTAAACAGAGACCCAAAGCAAACAAGTATGGAGGAGTTTTAGGGTTTTCAAGGGAGCGTGATTGCGATGATTATGATGATGAGGATGAAGATGAGGATGATGATGATAGTGATGATGAGGAAGGAGTGGTGGTGAGAAGGAAGGGGTTGATTTCAGGGTTATCAGCTGAATTGAGAGGTTTTGCTGAGAGGTTTATTGGGATGGAGAATTTGAAGATGGAGATGATGAAGGAAACACAGAGGTGTAGATTGGAGATGGAGAAGAAGCGGATCCAAATGATTCTCGAATCACAGAGGAGGATTGTTGATTCAATTGGAAGGGCTTTCGGGTCTTCCAAGAGGATGAAGATTAGTCAACAAATCTGA 927 0.4962 MATPSSPKLISPIATNDDASPPKRPQSIPWTHQETVNLIRSYQEKWYSLKRGPLRSTQWEEVAVVVAARCGYDSNHASKSAIQCRHKMEKLRQRHRAEKHRLSTGAAMARGGAWQYSGLMDELERGPLPISARPFMSMAPLGYNNENDHDEDDEDNDDDDDDDGVCYYNDDDDQRESYIKSKSINYIVKQRPKANKYGGVLGFSRERDCDDYDDEDEDEDDDDSDDEEGVVVRRKGLISGLSAELRGFAERFIGMENLKMEMMKETQRCRLEMEKKRIQMILESQRRIVDSIGRAFGSSKRMKISQQI 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2779g00018 308 MobiDBLite consensus disorder prediction 147 169 - -
Gabi2779g00018 308 MobiDBLite consensus disorder prediction 209 227 - -
Gabi2779g00018 308 MobiDBLite consensus disorder prediction 1 31 - -
Gabi2779g00018 308 Pfam Myb/SANT-like DNA-binding domain 29 122 IPR044822 -
Gabi2779g00018 308 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 20 292 IPR044823 -
Gabi2779g00018 308 MobiDBLite consensus disorder prediction 207 228 - -
Gabi2779g00018 308 MobiDBLite consensus disorder prediction 139 171 - -
Gabi2779g00018 308 Gene3D - 30 97 - -
Gabi2779g00018 308 Pfam Serine hydrolase (FSH1) 139 204 IPR005645 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2779g00018 Gabi-Chr2779 299713 301181 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2779g00018 30 123 Trihelix Transcription Factor Family AT3G14180 29.787 1.24e-09 57.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Gabi2779g00018 Myb_DNA-bind_4 7.4e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2779g00018 - - adu:107474774 330.872