Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2779g00006 ATGGGGAAGTACATGAAGAAATCAAGAGCTGGTGGTGGTGACGTTAAAGTGATGGAGGTTTCTTCCCCCGTCGGCGTTCGAACCAGAGCCAAAACCCTCGCTCTCCGCACTTCCGATGACTCCTCCTCCTTCCAATACCTCCAGCTCCGCAGCCGCCGCCTCCTCAAGGTCATCCCCACACCACCGCCGCCGCCACCTAAGAAGTCCTACTTTTGCGGTGCGTCTCTCGACTCCAGGTTAATTGATGAAGCGGAGGCTTCTTTTGGGGAAAACACTTTGGAGGTTGAAGTAAGAGACAGGAGCACCAGGGAAAGCACACCTTGTAGTTTAATAAGGGATTCAAATGCCGTTGACACCCCTGGTTCCACCACTAGAAAAAGGACTTCTACTTTCACAAACCAAATAATCCATGAAAACATACAAAGAAATATTCCAACAGCTTTTGAGATGGAGGAGTTCTTTGCTCATATAGAGCAGCAGCAACGAACAATGTTTATGGACAAGTACAATTTCGACATTGTCAATGATGTACCTCTTCCTGGACGGTACGAATGGGTCCAAGTACATAATCACTAG 576 0.4809 MGKYMKKSRAGGGDVKVMEVSSPVGVRTRAKTLALRTSDDSSSFQYLQLRSRRLLKVIPTPPPPPPKKSYFCGASLDSRLIDEAEASFGENTLEVEVRDRSTRESTPCSLIRDSNAVDTPGSTTRKRTSTFTNQIIHENIQRNIPTAFEMEEFFAHIEQQQRTMFMDKYNFDIVNDVPLPGRYEWVQVHNH 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2779g00006 191 PIRSF CKI_KRP_plant 1 190 IPR044275 GO:0004861|GO:0045736|GO:0051726
Gabi2779g00006 191 Gene3D p27 132 191 IPR044898 -
Gabi2779g00006 191 MobiDBLite consensus disorder prediction 107 127 - -
Gabi2779g00006 191 Pfam Cyclin-dependent kinase inhibitor 142 188 IPR003175 GO:0004861|GO:0005634|GO:0051726
Gabi2779g00006 191 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR 4-RELATED 1 189 IPR044275 GO:0004861|GO:0045736|GO:0051726
Gabi2779g00006 191 MobiDBLite consensus disorder prediction 100 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2779g00006 Gabi-Chr2779 96431 99510 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2779g00006 1 188 Core Cell Cycle Gene Families AT5G48820 43.443 1.01e-43 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2779g00006 - - gmx:100782379 205.297