Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2770g00001 ATGGGTGCGTGGTTCAGAAATGCAAAGCCATATTTGCTATTGTTGGGAGTACAATTTGGCTCAGCCGGAATGTTCATTTTTGCAATGGATGCTATCAACAAGGGTATGAGCCATTACGTCTTCATAGTCTACCGTAATGCCATCGCCGCCATAACTCTCGCTCCCTTCGCATTTGTTCTAGAAAGGAAAGTTAGGCCTAAGATGACTACCCGGATATTTTTAGAGATTGTGGCACTGGCTTTCTTCGAAATAATACTTGATCAATGCTTCGCCCTCTTGGGAATGAAATTAACGTCGGCATCTTTCCTATCGGCTGTGATGAACACCACACCCTCCATTACTTTTGTGTTGGCAGTCATTCTAAGATTGGAACACATGAAGATTAAGGAGGTAGCATGTCAAGCCAAAGTGGTTGGCACCGCAATAAGTTTTGGAGGCACGTTGCTAATGGCACTGTACAAGGGTCCCTTAATTAGTGTTGTGGGATCGTCAAACAGCCATGCTGGCCAGCCTGAGAATGTGAACGACCCAACTGGCAAGCACTGGGTCACAGGAACATGTTTCATCCTCATTGGTTGTGCAGGCTTTTCTACATTTTACATATTGCAGGCTATAACATTGAGAAAGTATAAAGCACCGATGTCCCTGGCCACCTGGGTTTGCTTTATAGGTGCACTTCAAAGCTCTGTAGTAGCTGTTATCGCGGAGCGCCATCGCACTCATGCCTGGTCTCGGGGTTGGGACACACGACTCTTTGCTCCCGCTTACGCGGGAATAGTTACATCAGGAGTCAAGTATTATATTCAAGGCATGGTCACAAAAGTCATGGGCCCAGTTATTGTGACTGCTTTTAATCCCTTGCGTATGATCATTGTCATAGCCTTGGCTTGCATCATCCTCTCTGAGCAACTTTACCTTGGAAGTATTATTGGAGCAATAGTGGTGGTTGCTGGACTTTATCTAGTTGTGTGGGGAAAATCTAAAGAATACAAAGGTCGAATGCCACCGTCCCCTGCAAAGGAGAACTCCATGCAAGAACAGCAGCTACCGGTCACAGATCCCAGCAATGATAGCAGCGATAATAAAGCTCAATTGATCATTCACGGTGATAAAAAAGGCGATGAGGAGACCACAATATCAAAAACAGAAAGTCAGATAAATTAA 1164 0.4502 MGAWFRNAKPYLLLLGVQFGSAGMFIFAMDAINKGMSHYVFIVYRNAIAAITLAPFAFVLERKVRPKMTTRIFLEIVALAFFEIILDQCFALLGMKLTSASFLSAVMNTTPSITFVLAVILRLEHMKIKEVACQAKVVGTAISFGGTLLMALYKGPLISVVGSSNSHAGQPENVNDPTGKHWVTGTCFILIGCAGFSTFYILQAITLRKYKAPMSLATWVCFIGALQSSVVAVIAERHRTHAWSRGWDTRLFAPAYAGIVTSGVKYYIQGMVTKVMGPVIVTAFNPLRMIIVIALACIILSEQLYLGSIIGAIVVVAGLYLVVWGKSKEYKGRMPPSPAKENSMQEQQLPVTDPSNDSSDNKAQLIIHGDKKGDEETTISKTESQIN 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2770g00001 387 SUPERFAMILY Multidrug resistance efflux transporter EmrE 234 328 - -
Gabi2770g00001 387 MobiDBLite consensus disorder prediction 340 363 - -
Gabi2770g00001 387 PANTHER WAT1-RELATED PROTEIN 10 339 IPR030184 GO:0016020|GO:0022857
Gabi2770g00001 387 SUPERFAMILY Multidrug resistance efflux transporter EmrE 44 154 - -
Gabi2770g00001 387 MobiDBLite consensus disorder prediction 333 387 - -
Gabi2770g00001 387 MobiDBLite consensus disorder prediction 364 379 - -
Gabi2770g00001 387 Pfam EamA-like transporter family 9 150 IPR000620 GO:0016020
Gabi2770g00001 387 Pfam EamA-like transporter family 185 323 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2770g00001 Gabi-Chr2770 9763 21204 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2770g00001 6 382 Nodulin-like Gene Family AT2G37460 41.910 2.11e-105 314
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2770g00001 - - gmx:102665912 601.282