Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2769g00011 ATGCAGGCCAGGGAGGTAACAGGATTCAATTATTTACTCCCTTCAAACCCTTCTCCTTACCAAACAAACTACACCATGGTTCAAAACAACATTCCCACATTTCAATCTCACAGAATCACTAACCAATTATATGGTTTCCACAACCCTCCTCATCAACTTCCTGACTTTAGTCCTCAATCATCATGCATCAGCAGCAACTCCACTTCTGATGAAGCAGATGAACAACAACTATGTCTCATCAATGAGAGAAAACACAGAAGGATGATATCTAATAGAGAATCTGCACGTAGATCACGCATGAGGAAGCAAAAACACCTTGATGAACTTTGGTCACAGGTGGTTTGGCTGAGGAATGAGAATCACCAACTAATAGAAAAGCTGAACCATGTGTCAGAAAACCATGACCAAGTCCTTCAAGAGAATGCTCAGCTGAAAGAAGAAGCTTCAGAACTTCGCCAAATGCTAAGAGACATGCAGATACATAGTCCATGCCCTTCTTTGAGCCCTTTAGAAGAAATCCCTTGTAGCTCAGCATATCTCAGATGTGATTCTACAAACCAATCCATCACAAGTTCCATGGACCTGCTTGGTTAA 594 0.4158 MQAREVTGFNYLLPSNPSPYQTNYTMVQNNIPTFQSHRITNQLYGFHNPPHQLPDFSPQSSCISSNSTSDEADEQQLCLINERKHRRMISNRESARRSRMRKQKHLDELWSQVVWLRNENHQLIEKLNHVSENHDQVLQENAQLKEEASELRQMLRDMQIHSPCPSLSPLEEIPCSSAYLRCDSTNQSITSSMDLLG 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2769g00011 197 CDD bZIP_plant_GBF1 84 135 IPR045314 GO:0003700|GO:0006355
Gabi2769g00011 197 SMART brlzneu 79 143 IPR004827 GO:0003700|GO:0006355
Gabi2769g00011 197 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 81 144 IPR004827 GO:0003700|GO:0006355
Gabi2769g00011 197 FunFam BZIP transcription factor 81 132 - -
Gabi2769g00011 197 Pfam bZIP transcription factor 83 141 IPR004827 GO:0003700|GO:0006355
Gabi2769g00011 197 Coils Coil 127 161 - -
Gabi2769g00011 197 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 8 170 IPR044521 -
Gabi2769g00011 197 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 86 101 IPR004827 GO:0003700|GO:0006355
Gabi2769g00011 197 SUPERFAMILY Leucine zipper domain 83 133 IPR046347 GO:0003700|GO:0006355
Gabi2769g00011 197 Gene3D - 81 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2769g00011 Gabi-Chr2769 211295 211898 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2769g00011 43 163 bZIP Transcription Factor Family AT3G30530 70.161 1.97e-52 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gabi2769g00011 bZIP_1 2.3e-14 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2769g00011 - - aprc:113867865 319.316