Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Gabi2762g00031 | ATGACTCTCAAAGGTTTGGTATCACTTGTCCTCAATTTAATTGGTCTAGCAGAGGAACCAAGGACCAAGGATGCACCTTTACCTTACCTGCTATCTAGTCCTATTGTACCACAGAAGATCAAGCACCAATCATCTGAATCTGCGGCAGCATCCAATTTTATGGAGAATAGTGAGTGTGGTTGGTGTTGTGTGTGCTTGTCAAGGTTAAACGACAAGGATGAAATCCGTGTCCTTCCTTGCTTGCACAAATTCCATAAGATTTGTGTAAATAGATGGCTTAAGGGTCACCACAAAACATGTCCACTCTGCCGTTTCTCAATGGGAGCTGAGGAGAAGTCTCATCGTGCCGAAATGTTCACTGAAGAGATGCTAATGTGGTTTTCTTCTTTCCATATAACTGGTATGTAA | 408 | 0.424 | MTLKGLVSLVLNLIGLAEEPRTKDAPLPYLLSSPIVPQKIKHQSSESAAASNFMENSECGWCCVCLSRLNDKDEIRVLPCLHKFHKICVNRWLKGHHKTCPLCRFSMGAEEKSHRAEMFTEEMLMWFSSFHITGM | 135 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Gabi2762g00031 | 135 | Pfam | Ring finger domain | 62 | 104 | IPR001841 | - | |
| Gabi2762g00031 | 135 | ProSiteProfiles | Zinc finger RING-type profile. | 62 | 104 | IPR001841 | - | |
| Gabi2762g00031 | 135 | SMART | ring_2 | 62 | 103 | IPR001841 | - | |
| Gabi2762g00031 | 135 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 38 | 110 | IPR013083 | - | |
| Gabi2762g00031 | 135 | SUPERFAMILY | RING/U-box | 61 | 108 | - | - | |
| Gabi2762g00031 | 135 | PANTHER | TARGET OF ERK KINASE MPK-1 | 41 | 112 | - | - |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Gabi2762g00031 | 62 | 104 | C3H Transcription Factor Family | AT5G45290 | 54.545 | 1.43e-12 | 61.6 |