Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2762g00010 ATGGCAGAAAACAAAGACGAAACCTGTTCTGAAAGTTCTGTATCTTCACCAGGTTCAAGCTTACCTATGGGTAATAAGTGCATAGACATGTTTGATAGATTATGCAGTTGTAACACTTTGTGGAAGAAAAGCAGCACCCCAAGAGGTCGAAGAACTTTCCAGAGCGATGTGGAAAAAGAAGAATTCCAGTATGCTAGTAGTCATTGTCTCTCATCCTACTATAGTGTGTTTGTGGTTCGACTAGCAATCATGGTCATGCTAGCCATCTTGATAGGGCTGCTTACTATACTGACATGGCATTTCACGAAGATTTATACAAGAAAATCACTTAATAGCTTGGCATATGGTCTGCGTTATGAACTTCTGCAACGTCCCATCTTGCGTATGTGGAACATTTTGAACTCTACTGCTGAAATTACAAATGCTCAGGTCAGGCTTTCCCAGTATGTGATCAGACGTTATAGCAACCCTGCAACTCAAGCAGAGCAAGTTGAGCTGTATGAAGCGATGAGGGCTGTGACATGGGCGCTGTTTGCTAGTAGAAAAGCTCTCAACTCAATAACTATCAATTATAAGAATGGATTTGTGCAGGCATTCCATAGAGATCTGAAGGATAACAATACATTTTACATCTACTCTGATCTTGCAAATTACTCCATAGGTGCCAGCAACTCTAACGAAATCAATTCCTTTTCAACACATCAAGCTTGGGAAGATAAAGCCATTCATGGTAACTATTCTGCCATTTGGTACCGCGAACCACTTGATCCTATCAGTGGCGAGAAGATAGGAAAAGCTATGCAAATTGCACCTGAAGACTTAATCAACATAGCTGGCCTTTCCCAAGTACCTGATGGTGTAGCTTCATGGCATGTTGCAGTGAGCAAGTTTACAGATTCACCATTGCTTTCAGCAGCATTGCCAGTTTGGGACTCTTCTAATAAGAGTATCATGGCAGTTGTGGGTGTCACAACTGCACTTTATAGTGTAGGACAGCTAATGAGAGAACTAGTTGAGTTGCATAGTGGCCATATGTATTTGACTTCCCAAGAAGGTTACTTACTTGCAACTTCCACAAGTGCACCTCTGCTCACAAATTCAACAAAGCCTCCCAAGCTTAAGATGGCTGTTGACTGTGAAGATGATGTAATAAAACTGGGAGCCGAATGGTTACAGAGAACTTATGGGAACAATTTTCCTCCAAGTCATGAGGTTCATGTAGAGAATGCCATGCTAGGCAACCAGCAATATTACATTGACTCATTCTTCCTAAACTTGAAGAGACTTCCTTTGGTAGGTGTAATTATCATACCAAGAAAGTATATCATGGGGAAGGTAGATGAAAGAGCATTCAAAACGTTGGTTATTCTGATATCAGCCTCATTATGTATTTTAGTCATTGGGTGTGTTTGCATTTTGATATTGACAAACGGAGTATCAAAGGAAATGAATCTAAGAGCTGAACTGATAAATCAACTGGAAGCAAGAAGGAAGGCAGAGGCATCAAGCAATTATAAAAGTCAATTCCTTGCAAACATGAGTCATGAACTGAGGACACCTATGGCAGCAGTAATCGGGTTGCTTGACATTCTTATATCTGATGACTGTCTCACAAATGAACAATACTCAACAGTTACTCAAATAAGAAAATGCTCAACTGCTCTGCTACGTCTTCTTAACAACATATTGGATCTGAGCAAGGTGGAATCTGGAAAACTGGTCCTAGAATATGCAGAATTTGATTTGGGACGGGAACTTGAAGGGCTTGTAGATATGTTTTCTGTCCAATGCATCAACCACAATGTAGAGACGGTTTTAGACCTATCTGATGATATGCCAAAGGTAGTTCGCGGTGATTCTGCTAGGGTAGTTCAAATATTTGCAAATTTGATCAACAATTCAATCAAGTTTACTCCATCGGGTCACATTATTCTGCGAGGATGGTGTGAAAACCTAAACTCTTGCACTGATAGTCCAAATTTTCCTCTTGACCTGAAGAAATCACGGAGTTTACAAAAGAGCAGAGAGAAGCCAAATTCAAACCACGCAAAGAGAACATCTATAAGAGATAACAAACTGATACTTTGGTTTGAAGTTGATGACACAGGCTGTGGTATTGACCCAAGTAAATGGGATTCTGTGTTTGAAAGCTTTGAGCAAGCTGATCCATCAACTACTCGACTGCATGGAGGCACTGGTCTTGGTCTTTGCATTGTCAGAAACTTGGTTAATAAGATGGGTGGAGATATCAAGGTTGTCAAAAAGGAGGGCCCAGGAACACTGATGCGATTATGCTTGCTACTCAATGCACCCATGGATGTCACAGAACAACATTGTGCAGTAGATTTGACAGATAGTGGCTTCGTGGTACTGCTTGCACTGCACGGCAACATGGGTCGAGTAATTACATCCAAGTGGTTACAGAAAAACGGGGTGTGCACAATGGAAGCGTCTGATTGGAATGGACTAACTCAAATTTTGAGGGAACTCTTTCATTCAAAAAGTTCAGTCCATAATAATGACTTGGATGCAAATTATCTAGTAAATGAGAGATTGAATTCTAAACTACTCAACATTCAAGATATGAGGAACCCGACTTTTGTCATTGTTGTTGACATTGAGCTACTTGACTTGAGCACAGATATATGGAAGGAACAGCTTAACTTCCTTCACAGGTACTTTGGGAGAGCAAAGTTTGTATGGATGCTAAATCATGACACCTCCAATACCATAAAGATGGAGCTCCGTAGGAAAGGGCATATCCTCATGGTCAACAAACCACTTTACAAAGCAAAAATGATTCATATTCTGGAAGCTGTCATAAAGGAAAGAAATCTTGAGCTACAAAAGAAAAACATGACTGCTCCTAGGACCACAATGAAAGAGGGTGATTTGCACGAGTTTCTTGAGATTGATTCAACTCATTTTGATGTTGCTAGCTCTGATGATTCTGACATATCTGAAAAGGTTGGTTCAAATCCTGTAAGTGCCAGTGGAGACAAACCAATTGAAAATCCACCATCACCAGATCAGATGAATAACGGCTTTGTTAGATTAACCAATGAATATTTACAAGACAATAATTTGAGGGAAGAAGAGTCTTGTCAGAGTAACCCCAATTCCAATGATGCCACTGAAGACACCAAACCTAAATCACTCTCAAGTAAAGCAATAAATGGAAAGAAATCTCTCGAGGGCCTAAGGATTTTGCTTGCAGAAGATACACCAGTAATTCAAAGGGTTGCAACCATAATGCTTGAAAAAATGGGAGCTGCTGTTGTTGCTGTAGGAGATGGACAACAAGCAGTAGATGCTCTCAATTGCAAGCTCGATGCTGAAGATTGTACAAGGGAGTCTCTCCAAAAGGAAAGAAACACAAGATCTCAAACAGAGATTTTGACTTACCCTCCATATGACTTGATCCTAATGGATTGTCAGATGCCAAAGATGGATGGCTATGAGGCAACAAAAGCAATCAGGAAATCAGAAGTGGGAACAGGCTTGCACATTCCCATTGTTGCTCTTACAGCCCATGCAATGTCATGTGATGAAGCCAAATGCCTTGAGGTGGGCATGGATGCTTACTTAACTAAGCCAATTGACTTCAAGATGATGGTGTCCACCATTCTTTCACTCACTAAAAGATCATCTTGA 3654 0.4059 MAENKDETCSESSVSSPGSSLPMGNKCIDMFDRLCSCNTLWKKSSTPRGRRTFQSDVEKEEFQYASSHCLSSYYSVFVVRLAIMVMLAILIGLLTILTWHFTKIYTRKSLNSLAYGLRYELLQRPILRMWNILNSTAEITNAQVRLSQYVIRRYSNPATQAEQVELYEAMRAVTWALFASRKALNSITINYKNGFVQAFHRDLKDNNTFYIYSDLANYSIGASNSNEINSFSTHQAWEDKAIHGNYSAIWYREPLDPISGEKIGKAMQIAPEDLINIAGLSQVPDGVASWHVAVSKFTDSPLLSAALPVWDSSNKSIMAVVGVTTALYSVGQLMRELVELHSGHMYLTSQEGYLLATSTSAPLLTNSTKPPKLKMAVDCEDDVIKLGAEWLQRTYGNNFPPSHEVHVENAMLGNQQYYIDSFFLNLKRLPLVGVIIIPRKYIMGKVDERAFKTLVILISASLCILVIGCVCILILTNGVSKEMNLRAELINQLEARRKAEASSNYKSQFLANMSHELRTPMAAVIGLLDILISDDCLTNEQYSTVTQIRKCSTALLRLLNNILDLSKVESGKLVLEYAEFDLGRELEGLVDMFSVQCINHNVETVLDLSDDMPKVVRGDSARVVQIFANLINNSIKFTPSGHIILRGWCENLNSCTDSPNFPLDLKKSRSLQKSREKPNSNHAKRTSIRDNKLILWFEVDDTGCGIDPSKWDSVFESFEQADPSTTRLHGGTGLGLCIVRNLVNKMGGDIKVVKKEGPGTLMRLCLLLNAPMDVTEQHCAVDLTDSGFVVLLALHGNMGRVITSKWLQKNGVCTMEASDWNGLTQILRELFHSKSSVHNNDLDANYLVNERLNSKLLNIQDMRNPTFVIVVDIELLDLSTDIWKEQLNFLHRYFGRAKFVWMLNHDTSNTIKMELRRKGHILMVNKPLYKAKMIHILEAVIKERNLELQKKNMTAPRTTMKEGDLHEFLEIDSTHFDVASSDDSDISEKVGSNPVSASGDKPIENPPSPDQMNNGFVRLTNEYLQDNNLREEESCQSNPNSNDATEDTKPKSLSSKAINGKKSLEGLRILLAEDTPVIQRVATIMLEKMGAAVVAVGDGQQAVDALNCKLDAEDCTRESLQKERNTRSQTEILTYPPYDLILMDCQMPKMDGYEATKAIRKSEVGTGLHIPIVALTAHAMSCDEAKCLEVGMDAYLTKPIDFKMMVSTILSLTKRSS 1217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2762g00010 1217 Gene3D - 493 572 - -
Gabi2762g00010 1217 ProSiteProfiles Histidine kinase domain profile. 512 770 IPR005467 -
Gabi2762g00010 1217 Pfam His Kinase A (phospho-acceptor) domain 506 571 IPR003661 GO:0000155|GO:0007165
Gabi2762g00010 1217 MobiDBLite consensus disorder prediction 1030 1057 - -
Gabi2762g00010 1217 FunFam Histidine kinase 1-like protein 493 572 - -
Gabi2762g00010 1217 MobiDBLite consensus disorder prediction 979 1015 - -
Gabi2762g00010 1217 CDD REC_hyHK_CKI1_RcsC-like 1069 1209 - -
Gabi2762g00010 1217 ProSiteProfiles Response regulatory domain profile. 1068 1213 IPR001789 GO:0000160
Gabi2762g00010 1217 Gene3D - 1045 1215 - -
Gabi2762g00010 1217 Gene3D - 573 771 IPR036890 -
Gabi2762g00010 1217 Coils Coil 1103 1123 - -
Gabi2762g00010 1217 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 618 768 IPR003594 -
Gabi2762g00010 1217 PANTHER TWO-COMPONENT HISTIDINE KINASE 61 776 - -
Gabi2762g00010 1217 CDD HisKA 506 567 IPR003661 GO:0000155|GO:0007165
Gabi2762g00010 1217 SUPERFAMILY CheY-like 1065 1214 IPR011006 -
Gabi2762g00010 1217 Pfam Response regulator receiver domain 1069 1208 IPR001789 GO:0000160
Gabi2762g00010 1217 SMART HisKA_10 505 571 IPR003661 GO:0000155|GO:0007165
Gabi2762g00010 1217 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 493 572 IPR036097 GO:0000155|GO:0007165
Gabi2762g00010 1217 SMART HKATPase_4 618 770 IPR003594 -
Gabi2762g00010 1217 MobiDBLite consensus disorder prediction 1 21 - -
Gabi2762g00010 1217 MobiDBLite consensus disorder prediction 7 21 - -
Gabi2762g00010 1217 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 560 766 IPR036890 -
Gabi2762g00010 1217 PRINTS Bacterial sensor protein C-terminal signature 713 723 IPR004358 GO:0016310|GO:0016772
Gabi2762g00010 1217 PRINTS Bacterial sensor protein C-terminal signature 695 709 IPR004358 GO:0016310|GO:0016772
Gabi2762g00010 1217 PRINTS Bacterial sensor protein C-terminal signature 730 748 IPR004358 GO:0016310|GO:0016772
Gabi2762g00010 1217 SMART REC_2 1067 1209 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2762g00010 Gabi-Chr2762 86619 93648 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2762g00010 22 1217 Histidine Kinase Gene Family AT2G17820 66.035 0.0 1614
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Gabi2762g00010 HATPase_c 6.4e-22 CL0025
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2762g00010 - - gmx:100807543 2075.06