Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2762g00009 ATGGCAGAAAACAAAGACGAAACCTGTTCTGAAAGTTCTGTATCTTCACCAGGTTCAAGCTTACCTATGGGTAATAAGTGCATAGACATGTTTGATAGATTATGCAGTTGTAACACTTTGTGGAAGAAAAGCAGCACCCCAAGAGGTCGAAGAACTTTCCAGAGCGATGTGGAAAAAGAAGAATTCCAGTATGCTAGTAGTCATTGTCTCTCATCCTACTATAGTGTGTTTGTGGTTCGACTAGCAATCATGGTCATGCTAGCCATCTTGATAGGGCTGCTTACTATACTGACATGGCATTTCACGAAGATTTATACAAGAAAATCACTTAATAGCTTGGCATATGGTCTGCGTTATGAACTTCTGCAACGTCCCATCTTGCGTATGTGGAACATTTTGAACTCTACTGCTGAAATTACAAATGCTCAGGTCAGGCTTTCCCAGTATGTGATCAGACGTTATAGCAACCCTGCAACTCAAGCAGAGCAAGTTGAGCTGTATGAAGCGATGAGGGCTGTGACATGGGCGCTGTTTGCTAGTAGAAAAGCTCTCAACTCAATAACTATCAATTATAAGAATGGATTTGTGCAGGCATTCCATAGAGATCTGAAGGATAACAATACATTTTACATCTACTCTGATCTTGCAAATTACTCCATAGGTGCCAGCAACTCTAACGAAATCAATTCCTTTTCAACACATCAAGCTTGGGAAGATAAAGCCATTCATGGTAACTATTCTGCCATTTGGTACCGCGAACCACTTGATCCTATCAGTGGCGAGAAGATAGGAAAAGCTATGCAAATTGCACCTGAAGACTTAATCAACATAGCTGGCCTTTCCCAAGTACCTGATGGTGTAGCTTCATGGCATGTTGCAGTGAGCAAGTTTACAGATTCACCATTGCTTTCAGCAGCATTGCCAGTTTGGGACTCTTCTAATAAGAGTATCATGGCAGTTGTGGGTGTCACAACTGCACTTTATAGTGTAGGACAGCTAATGAGAGAACTAGTTGAGTTGCATAGTGGCCATATGTATTTGACTTCCCAAGAAGGTTACTTACTTGCAACTTCCACAAGTGCACCTCTGCTCACAAATTCAACAAAGCCTCCCAAGCTTAAGATGGCTGTTGACTGTGAAGATGATGTAATAAAACTGGGAGCCGAATGGTTACAGAGAACTTATGGGAACAATTTTCCTCCAAGTCATGAGGTTCATGTAGAGAATGCCATGCTAGGCAACCAGCAATATTACATTGACTCATTCTTCCTAAACTTGAAGAGACTTCCTTTGGTAGGTGTAATTATCATACCAAGAAAGTATATCATGGGGAAGGTAGATGAAAGAGCATTCAAAACGTTGGTTATTCTGATATCAGCCTCATTATGTATTTTAGTCATTGGGTGTGTTTGCATTTTGATATTGACAAACGGAGTATCAAAGGAAATGAATCTAAGAGCTGAACTGATAAATCAACTGGAAGCAAGAAGGAAGGCAGAGGCATCAAGCAATTATAAAAGTCAATTCCTTGCAAACATGAGTCATGAACTGAGGACACCTATGGCAGCAGTAATCGGGTTGCTTGACATTCTTATATCTGATGACTGTCTCACAAATGAACAATACTCAACAGTTACTCAAATAAGAAAATGCTCAACTGCTCTGCTACGTCTTCTTAACAACATATTGGATCTGAGCAAGGTGGAATCTGGAAAACTGGTCCTAGAATATGCAGAATTTGATTTGGGACGGGAACTTGAAGGGCTTGTAGATATGTTTTCTGTCCAATGCATCAACCACAATGTAGAGACGGTTTTAGACCTATCTGATGATATGCCAAAGGTAGTTCGCGGTGATTCTGCTAGGGTAGTTCAAATATTTGCAAATTTGATCAACAATTCAATCAAGTTTACTCCATCGGGTCACATTATTCTGCGAGGATGGTGTGAAAACCTAAACTCTTGCACTGATAGTCCAAATTTTCCTCTTGACCTGAAGAAATCACGGAGTTTACAAAAGAGCAGAGAGAAGCCAAATTCAAACCACGCAAAGAGAACATCTATAAGAGATAACAAACTGATACTTTGGTTTGAAGTTGATGACACAGGCTGTGGTATTGACCCAAGTAAATGGGATTCTGTGTTTGAAAGCTTTGAGCAAGCTGATCCATCAACTACTCGACTGCATGGAGGCACTGGTCTTGGTCTTTGCATTGTCAGAAACTTGGTTAATAAGATGGGTGGAGATATCAAGGTTGTCAAAAAGGAGGGCCCAGGAACACTGATGCGATTATGCTTGCTACTCAATGCACCCATGGATGTCACAGAACAACATTGTGCAGTAGATTTGACAGATAGTGGCTTCGTGGTACTGCTTGCACTGCACGGCAACATGGGTCGAGTAATTACATCCAAGTGGTTACAGAAAAACGGGGTGTGCACAATGGAAGCGTCTGATTGGAATGGACTAACTCAAATTTTGAGGGAACTCTTTCATTCAAAAAGTTCAGTCCATAATAATGACTTGGATGCAAATTATCTAGTAAATGAGAGATTGAATTCTAAACTACTCAACATTCAAGATATGAGGAACCCGACTTTTGTCATTGTTGTTGACATTGAGCTACTTGACTTGAGCACAGATATATGGAAGGAACAGCTTAACTTCCTTCACAGGTACTTTGGGAGAGCAAAGTTTGTATGGATGCTAAATCATGACACCTCCAATACCATAAAGATGGAGCTCCGTAGGAAAGGGCATATCCTCATGGTCAACAAACCACTTTACAAAGCAAAAATGATTCATATTCTGGAAGCTGTCATAAAGGAAAGAAATCTTGAGCTACAAAAGAAAAACATGACTGCTCCTAGGACCACAATGAAAGAGGGTGATTTGCACGAGTTTCTTGAGATTGATTCAACTCATTTTGATGTTGCTAGCTCTGATGATTCTGACATATCTGAAAAGGTTGGTTCAAATCCTGTAAGTGCCAGTGGAGACAAACCAATTGAAAATCCACCATCACCAGATCAGATGAATAACGGCTTTGTTAGATTAACCAATGAATATTTACAAGACAATAATTTGAGGGAAGAAGAGTCTTGTCAGAGTAACCCCAATTCCAATGATGCCACTGAAGACACCAAACCTAAATCACTGTCCACTAAAGAAGCATCCTTTCCAGCAGAAGCTCAAGATGAAGATTCTGAATGTGGAGCAACACATAGGATCACCAGCTCAAGTAAAGCAATAAATGGAAAGAAATCTCTCGAGGGCCTAAGGATTTTGCTTGCAGAAGATACACCAGTAATTCAAAGGGTTGCAACCATAATGCTTGAAAAAATGGGAGCTGCTGTTGTTGCTGTAGGAGATGGACAACAAGCAGTAGATGCTCTCAATTGCAAGCTCGATGCTGAAGATTGTACAAGGGAGTCTCTCCAAAAGGAAAGAAACACAAGATCTCAAACAGAGATTTTGACTTACCCTCCATATGACTTGATCCTAATGGATTGTCAGATGCCAAAGATGGATGGCTATGAGGCAACAAAAGCAATCAGGAAATCAGAAGTGGGAACAGGCTTGCACATTCCCATTGTTGCTCTTACAGCCCATGCAATGTCATGTGATGAAGCCAAATGCCTTGAGGTGGGCATGGATGCTTACTTAACTAAGCCAATTGACTTCAAGATGATGGTGTCCACCATTCTTTCACTCACTAAAAGATCATCTTGA 3732 0.4068 MAENKDETCSESSVSSPGSSLPMGNKCIDMFDRLCSCNTLWKKSSTPRGRRTFQSDVEKEEFQYASSHCLSSYYSVFVVRLAIMVMLAILIGLLTILTWHFTKIYTRKSLNSLAYGLRYELLQRPILRMWNILNSTAEITNAQVRLSQYVIRRYSNPATQAEQVELYEAMRAVTWALFASRKALNSITINYKNGFVQAFHRDLKDNNTFYIYSDLANYSIGASNSNEINSFSTHQAWEDKAIHGNYSAIWYREPLDPISGEKIGKAMQIAPEDLINIAGLSQVPDGVASWHVAVSKFTDSPLLSAALPVWDSSNKSIMAVVGVTTALYSVGQLMRELVELHSGHMYLTSQEGYLLATSTSAPLLTNSTKPPKLKMAVDCEDDVIKLGAEWLQRTYGNNFPPSHEVHVENAMLGNQQYYIDSFFLNLKRLPLVGVIIIPRKYIMGKVDERAFKTLVILISASLCILVIGCVCILILTNGVSKEMNLRAELINQLEARRKAEASSNYKSQFLANMSHELRTPMAAVIGLLDILISDDCLTNEQYSTVTQIRKCSTALLRLLNNILDLSKVESGKLVLEYAEFDLGRELEGLVDMFSVQCINHNVETVLDLSDDMPKVVRGDSARVVQIFANLINNSIKFTPSGHIILRGWCENLNSCTDSPNFPLDLKKSRSLQKSREKPNSNHAKRTSIRDNKLILWFEVDDTGCGIDPSKWDSVFESFEQADPSTTRLHGGTGLGLCIVRNLVNKMGGDIKVVKKEGPGTLMRLCLLLNAPMDVTEQHCAVDLTDSGFVVLLALHGNMGRVITSKWLQKNGVCTMEASDWNGLTQILRELFHSKSSVHNNDLDANYLVNERLNSKLLNIQDMRNPTFVIVVDIELLDLSTDIWKEQLNFLHRYFGRAKFVWMLNHDTSNTIKMELRRKGHILMVNKPLYKAKMIHILEAVIKERNLELQKKNMTAPRTTMKEGDLHEFLEIDSTHFDVASSDDSDISEKVGSNPVSASGDKPIENPPSPDQMNNGFVRLTNEYLQDNNLREEESCQSNPNSNDATEDTKPKSLSTKEASFPAEAQDEDSECGATHRITSSSKAINGKKSLEGLRILLAEDTPVIQRVATIMLEKMGAAVVAVGDGQQAVDALNCKLDAEDCTRESLQKERNTRSQTEILTYPPYDLILMDCQMPKMDGYEATKAIRKSEVGTGLHIPIVALTAHAMSCDEAKCLEVGMDAYLTKPIDFKMMVSTILSLTKRSS 1243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2762g00009 1243 Pfam His Kinase A (phospho-acceptor) domain 506 571 IPR003661 GO:0000155|GO:0007165
Gabi2762g00009 1243 ProSiteProfiles Histidine kinase domain profile. 512 770 IPR005467 -
Gabi2762g00009 1243 CDD REC_hyHK_CKI1_RcsC-like 1095 1235 - -
Gabi2762g00009 1243 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 560 766 IPR036890 -
Gabi2762g00009 1243 PRINTS Bacterial sensor protein C-terminal signature 713 723 IPR004358 GO:0016310|GO:0016772
Gabi2762g00009 1243 PRINTS Bacterial sensor protein C-terminal signature 695 709 IPR004358 GO:0016310|GO:0016772
Gabi2762g00009 1243 PRINTS Bacterial sensor protein C-terminal signature 730 748 IPR004358 GO:0016310|GO:0016772
Gabi2762g00009 1243 Coils Coil 1129 1149 - -
Gabi2762g00009 1243 Gene3D - 1073 1241 - -
Gabi2762g00009 1243 PANTHER TWO-COMPONENT HISTIDINE KINASE 61 776 - -
Gabi2762g00009 1243 SMART REC_2 1093 1235 IPR001789 GO:0000160
Gabi2762g00009 1243 FunFam Histidine kinase 1-like protein 493 572 - -
Gabi2762g00009 1243 MobiDBLite consensus disorder prediction 979 1015 - -
Gabi2762g00009 1243 Gene3D - 493 572 - -
Gabi2762g00009 1243 CDD HisKA 506 567 IPR003661 GO:0000155|GO:0007165
Gabi2762g00009 1243 MobiDBLite consensus disorder prediction 1030 1059 - -
Gabi2762g00009 1243 SMART HisKA_10 505 571 IPR003661 GO:0000155|GO:0007165
Gabi2762g00009 1243 ProSiteProfiles Response regulatory domain profile. 1094 1239 IPR001789 GO:0000160
Gabi2762g00009 1243 SMART HKATPase_4 618 770 IPR003594 -
Gabi2762g00009 1243 MobiDBLite consensus disorder prediction 1 21 - -
Gabi2762g00009 1243 MobiDBLite consensus disorder prediction 7 21 - -
Gabi2762g00009 1243 MobiDBLite consensus disorder prediction 1030 1077 - -
Gabi2762g00009 1243 Gene3D - 573 771 IPR036890 -
Gabi2762g00009 1243 Pfam Response regulator receiver domain 1095 1234 IPR001789 GO:0000160
Gabi2762g00009 1243 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 618 768 IPR003594 -
Gabi2762g00009 1243 SUPERFAMILY CheY-like 1091 1240 IPR011006 -
Gabi2762g00009 1243 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 493 572 IPR036097 GO:0000155|GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2762g00009 Gabi-Chr2762 86619 93648 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2762g00009 22 1243 Histidine Kinase Gene Family AT2G17820 65.024 0.0 1602
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Gabi2762g00009 HATPase_c 6.6e-22 CL0025
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2762g00009 - - gmx:100807543 2119.35