Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2762g00004 ATGTCGTTATTCACTGGGTTTGCAGGTGGGAAATGGTTAGGATTTGTCTCAGCCATATGGGTTCAAGCAATCTGTGGAAACAATTATACTTTTGCCAATTATTCCGATGTATTGAAGAGTCTAATGGCTCTATCCCAGATGCAGCTTAACAATCTCTCCGTTGCTAAAGATGTTGGCAAGGCTTTTGGTGTTTTATCTGGTCTTGCCTCTGATAATTGGTCAACTTCAGTTATACTCATGATTGGAGCCATCATGGGATTCATAGGCTATGGAGTTCAATGGCTTGTTGTCAGCCAGAGAATCAGTCCACTCCCTTATTGGCTGATGTGTATATTCATGTGTATGGGGGGCAACAGCTCAACCTGGATGAACACCGCAGTGCTTGTGACTTGTATGAGGAATTTTCCACAAAATCGTGGCCCGATTTCTGGTATTCTCAAGGGTTATGTGGGACTCAGCACAGCAATCTTCACAGATATATGCACTGCTATGTTTTCCTCAGACCCCTCTATGTTTCTACTAATGCTTACCATTGTTCCTGCTGTTATTTGCATTATTGCTGCTCTTTTCCTTCATGAATCCCCACCAGCTTCCACTTATGCAGAAGAGAATCAAGAAACTCAATTCTTCAATATATTCAACTTGATTGCAGTTGCAGTAGCTGTTTACCTCTTGGCCTTTGACATCAGTGGACCTCATGGCCATGTTCTTTCCTTGGTTTTCACGGCAGGACTTCTTATCCTGTTAGCCATGCCACTTCTTGTTCCTTTATATTTGGTCATCTTCAAACCAAGGTCTAATCTTGACAAAGAAAAACAGATTCATGAACCATTGCTTGCCCAAAAAAATTTAGCAGAAAAGGAAGAGAGGCAGGATAATGAAGTGAGTGCAGGCACCAAGGTGGAGGAAGTTGAAATAAAACAAAAACCCATGATAGGGGAGGAGCATACCATCATTGAAATGGTAAAAACTATTGATTTCTGGGTTTTGTTTGTGTCCTTTCTATTTGGCGTAGGAACAGGACTTTGTGTGATGAATAACATGGGTCAGATGGGACTGGCACTTGGTTACTCTGATGTTTCTATATTCATTTCATTCATTAGCATATGGGGTTTCTTTGGACGCATTATTTCTGGTTCACTCTCAGAATACTACATCAGAAAATCAGCCATACCAAGGCTAGTTTGGAATGCTGCTTCTCAAATTTTGATGGCTCTGGGTTACATTGCAATGGCCATGGCCTTGCCAGGATCACTTTATATTGGTTCAATGTTAGTGGGAATATGCTATGGAGTCCGTTTCACTATAACACCAGCAGCAGCTTCAGAGCTATTTGGCCTCAAATACTATGGCTTATTATACAACATCCTCATCCTTAATCTTCCTATTGGTTCATTCATCTTTTCTGGTCTCATTGCTGGTTATCTTTATGATGTTGAAGCCACTAGTGTGCCTGGAGGGGGAAACACTTGCATTGGAGCACATTGTTACATGCTTGTGTATGTGATTATGGCCTTTGCCTGTGTTCTGGGATGTGCATTGGACCTGTTGCTTACAATTAGAACAAAGAATGTCTATTCCAAGATCCACCTAGAGAGAAGCCTTGTCAATTCTATAGTACGCCCATGTTCAACACAGAGATGA 1644 0.4148 MSLFTGFAGGKWLGFVSAIWVQAICGNNYTFANYSDVLKSLMALSQMQLNNLSVAKDVGKAFGVLSGLASDNWSTSVILMIGAIMGFIGYGVQWLVVSQRISPLPYWLMCIFMCMGGNSSTWMNTAVLVTCMRNFPQNRGPISGILKGYVGLSTAIFTDICTAMFSSDPSMFLLMLTIVPAVICIIAALFLHESPPASTYAEENQETQFFNIFNLIAVAVAVYLLAFDISGPHGHVLSLVFTAGLLILLAMPLLVPLYLVIFKPRSNLDKEKQIHEPLLAQKNLAEKEERQDNEVSAGTKVEEVEIKQKPMIGEEHTIIEMVKTIDFWVLFVSFLFGVGTGLCVMNNMGQMGLALGYSDVSIFISFISIWGFFGRIISGSLSEYYIRKSAIPRLVWNAASQILMALGYIAMAMALPGSLYIGSMLVGICYGVRFTITPAAASELFGLKYYGLLYNILILNLPIGSFIFSGLIAGYLYDVEATSVPGGGNTCIGAHCYMLVYVIMAFACVLGCALDLLLTIRTKNVYSKIHLERSLVNSIVRPCSTQR 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2762g00004 547 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 12 527 - -
Gabi2762g00004 547 Pfam Nodulin-like 11 257 IPR010658 -
Gabi2762g00004 547 Gene3D MFS general substrate transporter like domains 11 206 IPR036259 -
Gabi2762g00004 547 CDD MFS_Mch1p_like 10 512 - -
Gabi2762g00004 547 Gene3D MFS general substrate transporter like domains 208 515 IPR036259 -
Gabi2762g00004 547 SUPERFAMILY MFS general substrate transporter 26 524 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2762g00004 Gabi-Chr2762 35647 37568 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2762g00004 11 538 Nodulin-like Gene Family AT4G34950 62.157 0.0 711
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2762g00004 - - cit:102624072 746.888