Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2757g00001 ATGAAGAAAGTTGGTGGAGTTGCTGGTTGGGTTTTCAACACTAGTGATAATAATGAGAAAGAAAATCTGATTCGGCGTTTGGTGCAAAGGGTATTGAAGGAGTTGAGTAATACTCCAATGGTTGTGGCTGAGTTTGCAGTGGGGCTTGAAGAACGTGTTAGTAAGGTGATGAAGCTGTTAGAACTTGAATCCAATGGTGTGAGGGTTTTGGGTTTGTATGGGTATGGTGGGGTTGGTAAGACAACCCTTGCTAAGGGTCTTTTCAATAACCTTCTTAATCGTTTTGAGCATCGTTGCTTCATTTCAAGTGTGAGAGAATTTTCATCAAAAGATGATGGTTTGGTTTCTCTTCAAAGCAAAATCATTGAAAATCTTTTCCCTGGAGGAGGAGGAGGGGCTCCCATCATAAGTGATGTCGATTTTGGTATTTCTGTTATTAAAGGAAGACTTAGAGAAAATCGGGTTCTGCTTGTATTGGATGATGTTGATGATGTAAAGCAACTTGATGCTTTGTGTAAGAGGGAATGGTTTTATGATGGAAGCCGTGTGATAATTACCACAAGGGATACAAAAGTTTTACCAATGAGTCATGTCAATGAGTTGTATGAAGTTAGGGAGTTGTATGATTCTGAAGCTTTGGAGTTGTTTTGTTACCATGCATTCAGAAGAAAGGAACCTCCGGAAAATTTTCTGAATTTATCAAAGAAAATCGTGTCTCTTACGGGAACAATGCCTTTGGCTTTGGAAGTGTTTGGCTCGTTTTTGTTTGGTAAGAGGAGGGTGGAGGAATGGGAGGATGCTTTGGAAAAGCTGAGACTAATTCGCCCTAAGCATCTTCAGGATGTGTTGATGATAAGTTATAATGGGTTGGATGATCAAGAGAAGTGTATATTCCTTGATATTGCTTGTTTGTTTGTTCAAATGGGAATGAAGCGTGATGATGTGATTGATATATTGAGAGGTTGTGGTTTTAGGGGAGAGATAGCTATCACAGTTCTTGTGGAAAAATGCTTAATCAAAATCACTCAAGAGAATACCCTGTGGATGCATGATCAAATAAGAGACATGGGAAGACAAATTGTTCTACATGAAAACCTTGACGATCCTGGTATGCGTAGTAGACTCTGGGATCGTGCTGAAATCATGGCTGTTTTGAAGGATGTTAAGGGAACAAGGTGGATTCGAGGAATTGTCCTAGACTTTGAGGAAAGAAGGTATAATAAAAATAAGGTTGAATCAGTTTTTTCAAAGAACCTTCAATGGAGATCCAGTTTAGGAAATGCTTCAAGATACATCAAACAAAGCCTTAAGAATCATCTTCTACCTCAAGCAGAGAAAAGCAATGAGGTTATACTTCATACAAAATCCTTTGAACGAATGATTAACCTGAGACAGCTTCAGATCAATAATCTGGGATTGGAAGGAAAATTTCTTCCAGCTGAACTGAAGTGGCTACAGTGGCGAGGATGTCCTTTGGAATGCATGCCTTTGGACTCTTGGCCTCGAGAGCTGGCTGTTCTTGATCTCTCAAACAGTAAGAAAATGGAAAACTTGTGGGGATGGAAAAGTTACAAGGTGCCAGAGAAACTAATGGTCATGAACCTCTCCAACTGCATCCAACTTGTTGCCATTCCTGATTTATCTGGATGTAGACATTTAGAGAAGATTAATCTGGAGAACTGCATTAATCTAACAAGGATTCATGAATCAGTTGGCAGTTTGATTACCTTGCGTAGTTTGAATTTGACACGTTGCACAAACCTTATTGAGCTTCCCAGTGATGTCTCTGGGCTGAAACATCTAGAGAGCCTCTTTCTTTCTGAGTGCAGGAAGTTGAAAGCATTGCCTAAAAACATAGGAAGCCTGAAATCCTTGAAAGCACTTGTTGCTGATCACACAGCTATAGCAGAGCTACCCCAGTCCATTTTTCACCTGACCAAACTTGAAAAGCTTATTTTAGAAGGTTGCCAACATTTGAGAAGGCTGCCCAACTGTATTGGACATCTATGTTCTTTGCAAGAATTATCTCTTAATCAGTCTGGATTAGAAGAATTACCCAACTCTATTGGATCCTTGAAAAACCTTGAGAGGTTGAGTTTGATGTGGTGTGAATCTCTCACTGTGATTCCTGATTCTATAGGAACTCTCATATCATTGACAGAACTTTTGCTTAATAGCAGTTCAATTAGAGAACTCCCTTCTACCATTGGTTCTTTATCTTATCTGAGGGAGTTATCAGTTGGAAACTGTAAATTTCTCAGTAAATTGCCTGATTCAATTAAAAATTTGGCCTCAGTTGTTGAGCTTCAGTTAGATGGAACAGCCATCACAAATTTGCCAGATCAGATTGGAGAGATGAAACTATTGAGGAAACTTGAGATGAGGAATTGTAGGCATCTTGAATCTTTACATGAATCTATTTGCCAACTAGCATCTCTTACTACACTGAACTTAGTCAATGGAAATGTCAGGGAATTGCCACAAGATTTTGGATTGCTGGAAAATCTTGTCACCTTAAGATTGAACAAATGTAGAATGCTCAGAATGCTTCCAGCTTCTATTGGGAATTTGAAATCTCTATATCACCTTCTTATGGAGGAAACGGCTTTGTCAGACTTACCTGAAAGTTTTGGGATGCTCACAAGCTTGAGAACATTGAGAATGGCAAAGAGGCCAGATTTAGTTCCAAATGAAAATAACATGCTTGCAGAACCTGAAGTTCCCATTTCTCTAAAGAATCCCAACTCTTTTGTAATACCATCTTCCTTCTGCAATCTGACCATGCTAATTGAGCTAGATGCCCGTGCCTGGAGAATATCTGGGAAAATTCCAGATGATTTTGAGAAGTTATCATCATTAGAGACTTTAAATTTGGGCCAAAATAATTTTCATAGTCTTCCTTCCAGCTTGAAGGGCCTTTCCATTCTCAAAAAGCTTTCACTGCCAAACTGCTGTGAGCTGATCTCTCTCCCCTCACTTCCTTCAAGCTTGATTGAGCTGAACGTTGAAAACTGTTCTGCATTAGAAACCATCCATGACATGTCAAATTTAGAGAGTTTGCAGGAGTTGAATCTCACAAATTGTGTAAAAGTGGTGGATATTCCAGGTCTTGAATGCTTGAAGTCTTTGAGAAGGTTGTACTTGAGTGGTTGCGTTGCATGCTCCTCCCAAATATGTAAGAGACTTTCAAAGGTTGCATTGAGGAATTTGCAGAACTTGAGCATGCCAGGATCCAGATTACCTGAATGGTTTTCAGGACAAACTGTTCCCTTTTCCAAGCCCAAAAATCTTGAGCTAAAAGGTGTAATTGTTGGTGTTATTCTTTCAATAAACCATAACATTAATATACCTAATATAACGCGAGATCAAATGCCTGGAGTTATTGATGTTCAAGTAAATGTTCTCAAACTAGACAAACCTATCTTTAGTACAGTTTTGAATATACGTGGGGTGCCAAGGACGGATGAAGAACACATACACTTGTGTAGGTACCAAGATTACCATCAGTTGATAGCTTTCTTAAAAGATGCTGATACATTATCTGTGACTATGAGAAATCCACCTTTTGATAAGGGATTGGAGATGAAAAAATGTGGGGTTCATTTGATCTTTGAAGGGGATGATGATTATGATGGAGAAGAAGAATCATTGGACAAAGGCCTACAATCTGTCTCTGAAAAATTGGCCAAGTTTTTCAACACTTATGAAGGTGTTGGTCCTATCTATGCCACTGAGAGTGAAGATGAGTACCAAAAGGAATTGGTGCATGAAGAAGAAGAACCAAGATCATCTCATGCTACACTTAAAAGCAATTCCGTTCTTCTCTTCCTGATTAGTCTATTCATTCCGCTATTAAGTTGGTTTTACTTGAGGTATATGTCATCAAGTGTTGCTTAG 3897 0.3906 MKKVGGVAGWVFNTSDNNEKENLIRRLVQRVLKELSNTPMVVAEFAVGLEERVSKVMKLLELESNGVRVLGLYGYGGVGKTTLAKGLFNNLLNRFEHRCFISSVREFSSKDDGLVSLQSKIIENLFPGGGGGAPIISDVDFGISVIKGRLRENRVLLVLDDVDDVKQLDALCKREWFYDGSRVIITTRDTKVLPMSHVNELYEVRELYDSEALELFCYHAFRRKEPPENFLNLSKKIVSLTGTMPLALEVFGSFLFGKRRVEEWEDALEKLRLIRPKHLQDVLMISYNGLDDQEKCIFLDIACLFVQMGMKRDDVIDILRGCGFRGEIAITVLVEKCLIKITQENTLWMHDQIRDMGRQIVLHENLDDPGMRSRLWDRAEIMAVLKDVKGTRWIRGIVLDFEERRYNKNKVESVFSKNLQWRSSLGNASRYIKQSLKNHLLPQAEKSNEVILHTKSFERMINLRQLQINNLGLEGKFLPAELKWLQWRGCPLECMPLDSWPRELAVLDLSNSKKMENLWGWKSYKVPEKLMVMNLSNCIQLVAIPDLSGCRHLEKINLENCINLTRIHESVGSLITLRSLNLTRCTNLIELPSDVSGLKHLESLFLSECRKLKALPKNIGSLKSLKALVADHTAIAELPQSIFHLTKLEKLILEGCQHLRRLPNCIGHLCSLQELSLNQSGLEELPNSIGSLKNLERLSLMWCESLTVIPDSIGTLISLTELLLNSSSIRELPSTIGSLSYLRELSVGNCKFLSKLPDSIKNLASVVELQLDGTAITNLPDQIGEMKLLRKLEMRNCRHLESLHESICQLASLTTLNLVNGNVRELPQDFGLLENLVTLRLNKCRMLRMLPASIGNLKSLYHLLMEETALSDLPESFGMLTSLRTLRMAKRPDLVPNENNMLAEPEVPISLKNPNSFVIPSSFCNLTMLIELDARAWRISGKIPDDFEKLSSLETLNLGQNNFHSLPSSLKGLSILKKLSLPNCCELISLPSLPSSLIELNVENCSALETIHDMSNLESLQELNLTNCVKVVDIPGLECLKSLRRLYLSGCVACSSQICKRLSKVALRNLQNLSMPGSRLPEWFSGQTVPFSKPKNLELKGVIVGVILSINHNINIPNITRDQMPGVIDVQVNVLKLDKPIFSTVLNIRGVPRTDEEHIHLCRYQDYHQLIAFLKDADTLSVTMRNPPFDKGLEMKKCGVHLIFEGDDDYDGEEESLDKGLQSVSEKLAKFFNTYEGVGPIYATESEDEYQKELVHEEEEPRSSHATLKSNSVLLFLISLFIPLLSWFYLRYMSSSVA 1298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2757g00001 1298 Gene3D Ribonuclease Inhibitor 616 894 IPR032675 -
Gabi2757g00001 1298 Pfam NB-ARC domain 50 272 IPR002182 GO:0043531
Gabi2757g00001 1298 SUPERFAMILY L domain-like 786 1082 - -
Gabi2757g00001 1298 Gene3D - 28 201 IPR027417 -
Gabi2757g00001 1298 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 37 301 IPR027417 -
Gabi2757g00001 1298 Gene3D Ribonuclease Inhibitor 435 615 IPR032675 -
Gabi2757g00001 1298 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 3 711 IPR044974 GO:0006952
Gabi2757g00001 1298 Gene3D - 206 291 IPR042197 -
Gabi2757g00001 1298 SMART LRR_CC_2 739 766 IPR006553 -
Gabi2757g00001 1298 SMART LRR_CC_2 1017 1043 IPR006553 -
Gabi2757g00001 1298 SMART LRR_CC_2 550 577 IPR006553 -
Gabi2757g00001 1298 SMART LRR_CC_2 786 813 IPR006553 -
Gabi2757g00001 1298 SMART LRR_CC_2 692 725 IPR006553 -
Gabi2757g00001 1298 PRINTS Disease resistance protein signature 149 163 - -
Gabi2757g00001 1298 PRINTS Disease resistance protein signature 241 255 - -
Gabi2757g00001 1298 PRINTS Disease resistance protein signature 596 612 - -
Gabi2757g00001 1298 PRINTS Disease resistance protein signature 69 84 - -
Gabi2757g00001 1298 SUPERFAMILY L domain-like 349 780 - -
Gabi2757g00001 1298 SMART LRR_typ_2 716 739 IPR003591 -
Gabi2757g00001 1298 SMART LRR_typ_2 950 972 IPR003591 -
Gabi2757g00001 1298 SMART LRR_typ_2 833 857 IPR003591 -
Gabi2757g00001 1298 SMART LRR_typ_2 763 786 IPR003591 -
Gabi2757g00001 1298 SMART LRR_typ_2 810 832 IPR003591 -
Gabi2757g00001 1298 SMART LRR_typ_2 669 692 IPR003591 -
Gabi2757g00001 1298 SMART LRR_typ_2 622 645 IPR003591 -
Gabi2757g00001 1298 ProSiteProfiles Leucine-rich repeat profile. 952 974 IPR001611 GO:0005515
Gabi2757g00001 1298 Gene3D Ribonuclease Inhibitor 909 1135 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2757g00001 Gabi-Chr2757 8953 15102 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2757g00001 682 886 WRKY Transcription Factor Family AT4G12020 32.039 1.31e-09 61.2