Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2755g00029 ATGGGGGATGTAGCAGGAGTACTTTGGCAAGTAGCTACCTGTTTGTTCAGCTGCGGTAAAGTCCACGCTGCCTATGTTTATAAGCTAGAGAAGAATCTAGCATCATTACAAAAGAAGTGGGATTATCTTCTAAACATTAGCACAGATCGGCGAAGAAGAATCGATGAGGCTGAGGGCACTGGGGAGATGCAAAGGACAGATGAAGTGAATGGTTGGCTGCAAGAAGTTCAAAATCTTCAAAAGGTAATGGAGGAAGTTCGAAACCAAGGTTCTCAAGAAACTCATAATAAATGTCTAAGCGGTTGTTGCCCAAAGAATTGTGTGTCAAGCTACAAGTTAGGAAAGAGAGTTGTCGACATGCTTAGAGAGGTGGATGGACTCTCGGAGAAACGTTTTGTTGATATTACGCACAAGCTACCCCCTAGGCTGGTGGATGAGATGCCTTCTGTAGAGACTACAGGCTTGGATTTGATGCTCAACAAAGTCTGGAATGCTATTGAAGATGAAAATGTAAACATGATTGGCTTATATGGAATGGGTGGGGTTGGTAAAACCACCCTTATGAAGAGAATTCAAGGTGAATTTGGAAAGAGACAACACAAATTTGATATAGTGTTGTGGGCGGTGGTTTCTAGAGATTGTGATATTGATAAAATTATGGATGCCATTCGAAAGAGGTTAGGGATCAATGATGATATTTGGGACAAACGTAGTCCAGATGAAAGAGCGGGAAAGATTTATCGAGTCCTGAAACAAAAGAAATTTGTGCTAATATTAGACGATTTATGGGGAGAGTTGGAACTAGAAAAGGTGGGAGTTCCACTTCTGAAGGATACTAATAGTCATTCAAAAGTGTTGTTCACAACACGGAATGAGGATGTGTGTGCTAAAATGCAAGCGGGGAAGAAATTTGAAGTGGAATGTTTAAGACCGCAAGAAGCATTTGAATTGTTTCGTAAAATGGTAGGCGAGGAGACATTAAGCAGTCACCAAGATATTCGAGAGTTAGCATGGGATATAGCTAAAGAATGCAAAGGATTGCCACTAGCACTGGTTACAGTGGGACGTGCCATGTCAGGAGTGAAAAGCGTTGCAGCATGGAGTCAAGCCAAAGGTGATTTAAGAAGCTCCTCTTTCATACGTCTAAAGTTGGAAGAGGATGTGTTTCGTATCCTCAAGTTTAGCTATGACAGACTCCCAGATGAAACACACAAGAGTTGCTTCCTATATTGTGCACTATACCCAGAAGATTATGAAGTTGAAATTACAAATCTAATTGATCGATGGATCGGAGAGGGATTTTTGGGTAAAGGTAGGATGAAGAAGAGTATATATGATATGTATGAGGAAGGGGAATCTATCATTGAAAAATTAAAGCTTTCATGTCTCTTAGAGGGCGTTGAAGATTATGGTAATTGGAGGTTTGCAATTAAGATGCATGATGTGATCAGAGATATGGCACTATGGTTAGCCCGTGATGAAGTTGTAGTTGAAGGGGAGGCATTAGGCATGTCAGAAATGGATTTTGAAAGGTTGAATAATGTGGAAAGGATTTCAGTTATAAATGCGAGTGGAAGTTGGCGAGTACCAGCTTGTCCAAATCTCTTAACCCTATGTGTACAGGGGGATAATGTGAATATCACTGACTATTCAAATCTGAAATCCATGCCAAAGTTGAAAGTCTTAGACCTATCAGGCAGTTATATTGTATATCCACTCACAGAAATAGAAAAATTAATGAGCTTGGAATACCTTAATCTGTCAAATACAGGAATGCCAAAGGGATTGCAAATTGATTGGAAAAAGTTGAGGGTATTTCTTATGGAAGAAGTTAATTGTAACACCATTTCTTTAGGAGAGATTGAAAGTCTTGAGCAGTTGAAGGTGCTTAGATTAACTTCCTATTTTGGATTAACAAGTGCGGAAGAGGAGAAAGCACTACTAGAGAAGTTGGAGTGCTTACCAAAATTGGAAGAACTGTGCATCCAATTAACAACCACCCCAGGCCTCCTTAAGTTACTTGAGTCGAACAAATTGAGGGATTGCTTGAGACGTTTTGTGCTTGTCGGAATCATCACGTCACTTGAGGGAAGCCGAAGGTGA 2103 0.4037 MGDVAGVLWQVATCLFSCGKVHAAYVYKLEKNLASLQKKWDYLLNISTDRRRRIDEAEGTGEMQRTDEVNGWLQEVQNLQKVMEEVRNQGSQETHNKCLSGCCPKNCVSSYKLGKRVVDMLREVDGLSEKRFVDITHKLPPRLVDEMPSVETTGLDLMLNKVWNAIEDENVNMIGLYGMGGVGKTTLMKRIQGEFGKRQHKFDIVLWAVVSRDCDIDKIMDAIRKRLGINDDIWDKRSPDERAGKIYRVLKQKKFVLILDDLWGELELEKVGVPLLKDTNSHSKVLFTTRNEDVCAKMQAGKKFEVECLRPQEAFELFRKMVGEETLSSHQDIRELAWDIAKECKGLPLALVTVGRAMSGVKSVAAWSQAKGDLRSSSFIRLKLEEDVFRILKFSYDRLPDETHKSCFLYCALYPEDYEVEITNLIDRWIGEGFLGKGRMKKSIYDMYEEGESIIEKLKLSCLLEGVEDYGNWRFAIKMHDVIRDMALWLARDEVVVEGEALGMSEMDFERLNNVERISVINASGSWRVPACPNLLTLCVQGDNVNITDYSNLKSMPKLKVLDLSGSYIVYPLTEIEKLMSLEYLNLSNTGMPKGLQIDWKKLRVFLMEEVNCNTISLGEIESLEQLKVLRLTSYFGLTSAEEEKALLEKLECLPKLEELCIQLTTTPGLLKLLESNKLRDCLRRFVLVGIITSLEGSRR 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2755g00029 700 Coils Coil 69 89 - -
Gabi2755g00029 700 Gene3D - 137 307 IPR027417 -
Gabi2755g00029 700 FunFam Probable disease resistance protein At5g66910 308 395 - -
Gabi2755g00029 700 FunFam Probable disease resistance protein At1g61300 136 303 - -
Gabi2755g00029 700 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 34 672 - -
Gabi2755g00029 700 PRINTS Disease resistance protein signature 173 188 - -
Gabi2755g00029 700 PRINTS Disease resistance protein signature 344 358 - -
Gabi2755g00029 700 PRINTS Disease resistance protein signature 249 263 - -
Gabi2755g00029 700 PRINTS Disease resistance protein signature 554 570 - -
Gabi2755g00029 700 FunFam Probable disease resistance protein At1g63360 396 489 - -
Gabi2755g00029 700 Gene3D - 396 488 IPR036388 -
Gabi2755g00029 700 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 137 411 IPR027417 -
Gabi2755g00029 700 Gene3D Ribonuclease Inhibitor 503 695 IPR032675 -
Gabi2755g00029 700 Gene3D - 308 395 IPR042197 -
Gabi2755g00029 700 SUPERFAMILY L domain-like 474 674 - -
Gabi2755g00029 700 Pfam NB-ARC domain 158 397 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2755g00029 Gabi-Chr2755 362179 372207 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2755g00029 170 414 WRKY Transcription Factor Family AT5G45050 25.969 2.63e-08 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2755g00029 - K13459 adu:107480591 672.93