Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2755g00025 ATGGAGGTTGTAGGAGTACTTTGGGAAGTTGCTACCTGTTTGTTCAGCAGCGGTAAAGTCCACGCTTCCTATGTTTATAAGCTAGAGAAGAATCTCGCATCATTACAAGAGAAGTGGGTTGATCTTCAAAACATTAGGAAGGATCTGCATAGAAGAATCGATGATGCTGAGGAGACTGGGGAGATGAAAAGGACAGAGGAAGTGAATGGTTGGCTGGAAAAAGTTCAAAAACTTGAAGAGGTAATGGAGGAAATTCAAAACCAAGGTTCTCTAGAAACTCATAATAAATGTCTAAGCGGTTGTTGCCCAAAGAATTGTGTGTCAAGCTACAAGTTAGGAAAGAGAGTTGTGGCCATGCTTAGGGAGGTGGATGGACTCTCGGAGAAACGTTTAGTTGATATTGCTTACAACCTACACTCTGGGGTGGTGGATGAGATGCCTTATGTTGAGACTATAGGCTTGGATTTGATGCTCAACAGAGTCTGGAATACTATTGAAGATAAAAATGTAAACATGATTGGTTTATATGGAATGGGTGGGGCTGGAAAAACCACCCTTATGAAGAGAATTCACGGTGAATTTGGAAAGAGACAGCACAACTTTGATATAGTGTTGTGGGTGGTGGTTTCTAGATATTGTGATATTGATAAAATTATGGATTCCATTCGAAAGAGCTTAGGGATCAATGATTATATTTGGGACAAACGTAATCCAGATGAAAGAGTGGCAACGATTTATCGAGTCCTGAAAACAAAGAAATTTGTGCTAATGTTAGACGATTTATGGGGAGAGTTGGAACTAGAAAAGGTGGGAGTTCCACATCCGAAGGATACTAATAATCATTCAAAAGTGTTGTTCACAACACGGAATGAGGATGTGTGTGCTAAAATGCAAGCGGGGAAGAAATTTGAAGTGGAACGTTTAGGAGAGCAAGAAGCATTTGAATTGTTTTGTAAAATGGTAGGTGAGGAGACATTACGCAGTCACACAGATATTCAAATGTTAGCATGGGATATAGCTAAATTATGCAAAGGATTGCCACTAGCACTGGTTACAGTGGGACGTGCCATGTCAGGAGTGAAAAGCGTTGCAGCATGGAGTCAAGCCATGGGTGATTTAACACGGTTCTCTTTCATAGGTCTAAAGTTGGAAAAGGATATGTTTCGTATCCTGACGTTTAGTTATGACAGACTCCCAGATGAAACACACAAGAGTTGCTTCCTATATTGTGCACTATACCCAAAAGATTATGAAGTTGAGGTTAAAGATTTAATTGATCGATGGATCGGAGAGGGATTTCTGGGTAAAGGTAGAATGAAGAAGAGTATATATGATATGTATGAGGAAGGGGAATCTATCATTGAAAAATTAAAGCTTTCATGTCTCTTAGAGGGCGTTGAAGATTATCGTAATGGGACATTTAGAATTAAGATGCATGATGTGATAAGAGATATGGCACTATGGTTAGCCCGTGATGGAGATCGAAATAAAGACAAAGTTGTAGTTGAAGGGGAGGCATTAGGCATGTCAGAAATGGATTTTGAAAGGTTGAATGATGTGGAAAGGATTTCAATTATAAATGCTGCGAGTGGAAGTTGGCAAGTACCATCTTGTCCAAATCTCTTAACCCTATGTGTACGGGGGGATGATGTGAATATCACTGACTTTTCGAATCTGGAATCCATGACAAGGTTGAAAGTCTTAGACCTATCAGACAATGATATTGACCATCCACTAACAGAAATAAAAGAATTAATGAGGTTGGAATACCTTAATCTGTCATTTACGAAAATACGAAATGGGTTGCAAATTGGTTGGAAGAATTTGAAAATGTTGAGGGTACTGCTTATGGAATATCTTAATTGTAACATCATTTCTTTAAAAGAGATTGAAAGTCTTAAGCAGTTGAAGGTGTTTAGATTAATTTCCTATTTTGGATCATTAAGTGCAGAAGAGGAGAAAGCACTACTAGAGAAGTTGGAGTGCTTACCAAAATTGGAAGAACTGTGCATCGAATTAAGAACCACCCCAGGTCTCCATAAGTTACTCGAGTCGAACAAATTGAGGGATTGCTTGAGACGTTTTCTGCTTCGGAGTATCACGTCATTTGATATGGCATCATTTTTAGCATCTGGAATGAAGCATCTGGAATGGATAGATTTACGGGAAATAGAAAATATTAAGGAAAGTTCACCCATTGCTGACACTTTCCATCTTCCCAAGCTTCGTCAGGTGCAGATTGTAGATTGTCAATCAATAACTCATTTGACATGGCTGAGGTATGCTCCGCTTCTTGAGTATCTTTATGTTGCCAATTGTGATTCAATTGAAGAAGTGGTGAAGGAAGCCGAGGATGACAGAGACAACTCTAATGATATATTCCCAAATCTTAGACATCTCTCCCTTAATCATTTGCCAAAGCTGAAGAGCATCCACAAGAGAGCATTGGCTTTTCCTTCCCTTGAATTCATTGCTATTGGTGATTGCCGAAATTTGAGGACGCTTTTCCTTTGA 2514 0.3922 MEVVGVLWEVATCLFSSGKVHASYVYKLEKNLASLQEKWVDLQNIRKDLHRRIDDAEETGEMKRTEEVNGWLEKVQKLEEVMEEIQNQGSLETHNKCLSGCCPKNCVSSYKLGKRVVAMLREVDGLSEKRLVDIAYNLHSGVVDEMPYVETIGLDLMLNRVWNTIEDKNVNMIGLYGMGGAGKTTLMKRIHGEFGKRQHNFDIVLWVVVSRYCDIDKIMDSIRKSLGINDYIWDKRNPDERVATIYRVLKTKKFVLMLDDLWGELELEKVGVPHPKDTNNHSKVLFTTRNEDVCAKMQAGKKFEVERLGEQEAFELFCKMVGEETLRSHTDIQMLAWDIAKLCKGLPLALVTVGRAMSGVKSVAAWSQAMGDLTRFSFIGLKLEKDMFRILTFSYDRLPDETHKSCFLYCALYPKDYEVEVKDLIDRWIGEGFLGKGRMKKSIYDMYEEGESIIEKLKLSCLLEGVEDYRNGTFRIKMHDVIRDMALWLARDGDRNKDKVVVEGEALGMSEMDFERLNDVERISIINAASGSWQVPSCPNLLTLCVRGDDVNITDFSNLESMTRLKVLDLSDNDIDHPLTEIKELMRLEYLNLSFTKIRNGLQIGWKNLKMLRVLLMEYLNCNIISLKEIESLKQLKVFRLISYFGSLSAEEEKALLEKLECLPKLEELCIELRTTPGLHKLLESNKLRDCLRRFLLRSITSFDMASFLASGMKHLEWIDLREIENIKESSPIADTFHLPKLRQVQIVDCQSITHLTWLRYAPLLEYLYVANCDSIEEVVKEAEDDRDNSNDIFPNLRHLSLNHLPKLKSIHKRALAFPSLEFIAIGDCRNLRTLFL 837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2755g00025 837 Gene3D Ribonuclease Inhibitor 688 836 IPR032675 -
Gabi2755g00025 837 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 148 410 IPR027417 -
Gabi2755g00025 837 FunFam Probable disease resistance protein At1g61300 137 302 - -
Gabi2755g00025 837 Coils Coil 773 793 - -
Gabi2755g00025 837 Gene3D - 395 487 IPR036388 -
Gabi2755g00025 837 Coils Coil 68 88 - -
Gabi2755g00025 837 Gene3D - 307 394 IPR042197 -
Gabi2755g00025 837 PRINTS Disease resistance protein signature 560 576 - -
Gabi2755g00025 837 PRINTS Disease resistance protein signature 172 187 - -
Gabi2755g00025 837 PRINTS Disease resistance protein signature 343 357 - -
Gabi2755g00025 837 PRINTS Disease resistance protein signature 248 262 - -
Gabi2755g00025 837 SUPERFAMILY L domain-like 477 835 - -
Gabi2755g00025 837 Pfam NB-ARC domain 157 396 IPR002182 GO:0043531
Gabi2755g00025 837 Gene3D - 138 306 IPR027417 -
Gabi2755g00025 837 Gene3D Ribonuclease Inhibitor 509 687 IPR032675 -
Gabi2755g00025 837 FunFam Probable disease resistance protein At1g63360 395 488 - -
Gabi2755g00025 837 FunFam Probable disease resistance protein At5g66910 307 394 - -
Gabi2755g00025 837 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 33 836 - -
Gabi2755g00025 837 ProSiteProfiles Leucine-rich repeat profile. 564 586 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2755g00025 Gabi-Chr2755 313258 317317 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2755g00025 148 837 WRKY Transcription Factor Family AT5G45050 20.080 2.40e-06 49.7