Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2755g00014 ATGGCTTCTGCTTCGTCTTCTTCTTCCTCGTCGTCCAAGCTCTGCTACAACCCTGACTGCAAAGAATTCAAGTCCGAAAGACCTAAACAAGGTTGGAAACTTCGTTCCGGAGAACGAGCCGAGCTTTGCGATCGATGCGGTACTGCTTTTGAAGAGGGAAGATTTTGCGAAACTTTTCACTTGAATGCTTCTGGTTGGAGGAATTGTGAGACTTGTAGGAAGCGGATTCATTGTGGATGTATTGTCTCAGATAATTCCTTTATGCTGTTGGATCCTGGAGGAATTGAATGCAGTGGATGTGCAAGGGAACATAGTATTTTGTCGTCGATCCGGCCATGGCCACAATCTTTTTCCTTTCAAAATCGTTTGTCTGATAGACTTAGAGACCTGCCTGCAAAAAGTTGGAATCAATTACTTAGATCTGGTCCTGTACCATGGAAGGAAGCACCCAGTCTACTCAATTCAGTTTCTTCATCTGACATGTATCCGGATGTGTCCTCTCTAGTTGAATTATCAAATAAAGTTGACAAAATTTATGGCAATGAAACGTTTCCTGTCTCTTCCTTGGAAAAGAAAAATGAGGATTTGTCTGGAATATCTAATTGGAGCACTAAGCTTGGTTCACGGGAAATGATGCTTATGAATGGAATGAGGAATGAAGACAAATCAAGTTCATGTTTAAATATTTGCCAGCAGTCTCCTTCTCTGAAGGAAGATTCATCTCCACAAGCATTTGGTTTGTCTATACCTTACACTTCTCCAAATGAAAGAAATGGTCAAATTGGGGTAACTGGAAATCATCTACAACAAAATCCTCCACCTCCTCCAGGAAAACAATTTAGTGGCCCTGTTCATTTATCACTTGACTCATTAGGTGAAACTCAGGTTCACAATGGACGGCCTCGAGTAGATGACCGAGGAAGAAACCAGTTACTACCACGATACTGGCCCAGGTGTACTGAGCTGGAGTTACAGAAAATATCTATTGATTCTAATTCTGCCATTACTCCATTGTTTCAAAAAACCTTGAGTGCTAGTGATGCTGGGCGAATTGGGCGTTTAGTGCTACCAAAAAAATGTGCCGAGGCCCACTTCCCTAAAATTTATCAGCCTGAAGGACTGCCGCTCAAAATCCTTGATGCAAAAGGCAAGGAATGGATATTTCAGTTTCGCTTCTGGCCCAACAATAACAGCAGAATGTATGTTTTAGAGGGTGTCACTCCCTGCATACAGTCCATGCAGTTGCAAGCTGGTGACACAGTAACGTTTAGTCGGTTGGAGCCAGAAGGGAGATTGGTTATGGGGTTTCGAAAAGTTTCAGGTGCTACCCCATCTGATCAGGACAATGAAACAAATAAGTCTGGAAATGGATTCTCTGCGCTTGAAGTTGAGCTGGCTGATCCTAATTCATGGTCTAAAGTGGATAAGTCTGGCTACATAGCAAAAGAAGCACTGGGGAACAAATCTTCAATCTCTAGAAAGAGAAAGAGCAGCATTTTGGGTTCAAAGAGTAAACGTCTAAAAATTGAAAATGAGGACCTAATAGAGCTGAAGATTACATGGCAAGAAGCTCAAGGCCTGCTCCGTCCCCCACCTAACCATGTTCCCAGCATTGTGGTGATTGAAGGTTTTGAATTTGAGGAATATGAGGATGCTCCTGTGCTTGGGAAGCCAACCATTTTCACCACTGGTAATGTGGGTGAAAAGATCCAGTGGGCTCAATGCGAATTTTGTCTTAAGTGGCGCAAATTACCAGCAAGTGCACTTCTTCCATCAAAATGGACATGTTCTGATAATTCATGGGACCTGGAAAGATCTTCGTGTTCATCACCACAAGAGCTGACCGGAGAACAGCTTGAGAATCTGCTACCCTCTCGTAATGCAGCTGTTTCCAAGAAAAGGAAGGCTGCCAAGCAGGATCCTGATAATGTTGAGGCTTTAGAAGGACTTGACACACTTGCAGACCTAGCTATCTCGGGAGAGTGTGAGGCACTCCCGGCTTCTGTCCAGGCCACAACGAAACACCCACGGCATAGACCTGGCTGCTCTTGCATTGTTTGCATTCAGCCTCCAAGTGGGAAGGGCCCCAAGCATAAGCAGACATGCACTTGTAATGTATGCTTAACAGTGAAGCGCCGTTTTCGTACCCTAATGTTACGGCGTGAGAAGAAACAATCGGAAAGAGAGGCAGAGACAACACGGAAAAAGGAGCAGCAGCTGTTACCTTCATCTGAAATTTTGATTGATGATGATTCACTGGCATGTAATAACACGGGAGATAATAGCCCAAACCAGAACCGGGAGGGCGTTGATGGTTCTGATGATAATCCCAAACGGATAAAATTATCTGCCTTGCCATTCAAAGGCCAAATTGACCTCAATATCCAGCCAGAGCGAGAGGAAGAGTTATCACCTAGTTCTGATTCCGGTAGCATGGTGAAGGTGCTCCCTGATGCTACTGAAAGGTATATCAGACAGCGGTGTATGTTGAAATCTGCTGCTACAGATTCATCAAGCAGTCAGTCACAGCGAGTTGGAGATGGAATGAGAGAAGAGGAACTAAGTAATGGTGTTGTAGCCCTTGGAAACAATAGTCATAATGCTGATCAGGAACATGCCCAAGCTTTGTCTATGAATGTGTGA 2643 0.4408 MASASSSSSSSSKLCYNPDCKEFKSERPKQGWKLRSGERAELCDRCGTAFEEGRFCETFHLNASGWRNCETCRKRIHCGCIVSDNSFMLLDPGGIECSGCAREHSILSSIRPWPQSFSFQNRLSDRLRDLPAKSWNQLLRSGPVPWKEAPSLLNSVSSSDMYPDVSSLVELSNKVDKIYGNETFPVSSLEKKNEDLSGISNWSTKLGSREMMLMNGMRNEDKSSSCLNICQQSPSLKEDSSPQAFGLSIPYTSPNERNGQIGVTGNHLQQNPPPPPGKQFSGPVHLSLDSLGETQVHNGRPRVDDRGRNQLLPRYWPRCTELELQKISIDSNSAITPLFQKTLSASDAGRIGRLVLPKKCAEAHFPKIYQPEGLPLKILDAKGKEWIFQFRFWPNNNSRMYVLEGVTPCIQSMQLQAGDTVTFSRLEPEGRLVMGFRKVSGATPSDQDNETNKSGNGFSALEVELADPNSWSKVDKSGYIAKEALGNKSSISRKRKSSILGSKSKRLKIENEDLIELKITWQEAQGLLRPPPNHVPSIVVIEGFEFEEYEDAPVLGKPTIFTTGNVGEKIQWAQCEFCLKWRKLPASALLPSKWTCSDNSWDLERSSCSSPQELTGEQLENLLPSRNAAVSKKRKAAKQDPDNVEALEGLDTLADLAISGECEALPASVQATTKHPRHRPGCSCIVCIQPPSGKGPKHKQTCTCNVCLTVKRRFRTLMLRREKKQSEREAETTRKKEQQLLPSSEILIDDDSLACNNTGDNSPNQNREGVDGSDDNPKRIKLSALPFKGQIDLNIQPEREEELSPSSDSGSMVKVLPDATERYIRQRCMLKSAATDSSSSQSQRVGDGMREEELSNGVVALGNNSHNADQEHAQALSMNV 880
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2755g00014 880 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS07G0563300 12 840 - -
Gabi2755g00014 880 MobiDBLite consensus disorder prediction 254 280 - -
Gabi2755g00014 880 ProSiteProfiles B3 DNA-binding domain profile. 339 440 IPR003340 GO:0003677
Gabi2755g00014 880 MobiDBLite consensus disorder prediction 254 268 - -
Gabi2755g00014 880 MobiDBLite consensus disorder prediction 720 738 - -
Gabi2755g00014 880 MobiDBLite consensus disorder prediction 861 880 - -
Gabi2755g00014 880 SMART B3_2 339 440 IPR003340 GO:0003677
Gabi2755g00014 880 Pfam CW-type Zinc Finger 571 613 IPR011124 GO:0008270
Gabi2755g00014 880 Gene3D - 317 442 IPR015300 -
Gabi2755g00014 880 Gene3D - 564 615 - -
Gabi2755g00014 880 FunFam B3 domain-containing transcription repressor VAL1 317 444 - -
Gabi2755g00014 880 SUPERFAMILY DNA-binding pseudobarrel domain 336 437 IPR015300 -
Gabi2755g00014 880 MobiDBLite consensus disorder prediction 720 813 - -
Gabi2755g00014 880 ProSiteProfiles Zinc finger CW-type profile. 566 616 IPR011124 GO:0008270
Gabi2755g00014 880 MobiDBLite consensus disorder prediction 831 845 - -
Gabi2755g00014 880 MobiDBLite consensus disorder prediction 750 770 - -
Gabi2755g00014 880 Pfam B3 DNA binding domain 339 437 IPR003340 GO:0003677
Gabi2755g00014 880 MobiDBLite consensus disorder prediction 831 854 - -
Gabi2755g00014 880 CDD B3_DNA 337 438 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2755g00014 Gabi-Chr2755 193412 207236 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2755g00014 11 724 B3 DNA Binding Superfamily AT4G32010 45.157 0.0 552
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Gabi2755g00014 B3 1.3e-15 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2755g00014 K09287 - gmx:100807252 1418.68