LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gabi2755g00007	ATGAACGGGAGGTATGTGGAGAGATCGAGCGGTGTGGCGAGGGAGAAGCGAAGTTTGGATTCGAGTTCTGCTGAAGAAGGACAACCAGATCGGAAGCGACCTGCTTTGGCTAGTGTAATTGTTGAAGCCCTGAAGGTGGATAGTCTGCAGAAACTTTGCTCATCACTGGAGCCTATTTTACGCAGAGTTGTTAGTGAAGAAGTGGAGCGTGCTTTGGCAAAACTAGGCCCTGCCAAGCTTACTGGGAGTTCTTCTCCAAAGCGCATAGAAGGCCCTGATGGCAAAAATTTACAATTGCACTTCAAGACCAGGCTATCCCTTCCCCTCTTTACTGGTGGGAAAGTGGAGGGTGAGCAAGGAGCAACCGTACATATTGTTTTGATTGATGCAAACACGGGCCATGTTGTCACATCGGGCCCAGAGTCATGTGTCAAATTAGATGTCATTGTTCTTGAGGGGGATTTCAATAATGAAGATGATGATACTTGGAGTGAAGATGAGTTTGAGAGTCATATTGTGAAAGAGCGGGAAGGAAAAAGGCCTCTTCTGACTGGCGATCTGCAAGTCACACTGAAAGAGGGTGTAGGAACACTGGGTGAGCTCACTTTTACAGACAACTCAAGCTGGATAAGGAGTAGGAAGTTCAGGTTGGGGCTAAAAGTTGCCTCGGGTTATTGTGAGAGAATGCGTATTCGTGAAGCCAAAACAGAAGCTTTCACTGTTAAGGATCATCGTGGAGAATTATACAAGAAACACTACCCACCTGCTTTGAATGACGAGGTCTGGAGACTGGAGAAGATTGGCAAGGATGGGTCATTTCACAAAAGGCTAAATAAAGCAGGAATATATACTGTTGAAGACTTCCTAAGACTTGTGGTCAGAGACCCTCAGAGATTGCGGAATATTCTTGGGAGCGGCATGTCAAATAAGATGTGGGATAGTCTTGTTGAGCATGCAAAGACTTGTGTTCTCAGTGGAAAACTTTATGTATATTATCCTGATGATGCAAGAAACGTGGGTGTTGTTTTCAACAATATTTATGAACTGGGTGGCTTAATTGCCAGCGACCAATATTACTCTGCTGATTCCCTCTCTGAGAGTCAGAAGGTTTATGTAGACACGTTGGTGAAGAAGGCATATGATAATTGGATGCATGTTATTGAGTATGATGGGAAGTCTCTGCTAAATTACAGTCAGGATAAGACTTTGGACACTGCTCATCGTCAGGCTCAAATGGGCCCCCAGGAATATTCAAACTCATTTCCGCAGATTTCCATCCCAAGTTATCATGATGGTACAACTACCAGATACTCCATGCAACCACCGAATGCTAATCATAATTCTTCTATTCAGTTTGATGATAATGCATTTTCAATACAAAACCAGTTGATTAGTGTTTCACACCAAGCTCAACTTCCAACAAATGAAAATGGGCTCACTCTTGGTCCACTACAATCAGCCACACATGGCTTCCAGACTGCCAGCATTTCAAATCCAACATACAGAGGAGTTGAAGACTTCTTCCCAGAGGAGGAGATCCGTATTAGAAGCCATGAGATGCTAGAAAATGAAGATATGCAGCATCTTCTCCGTATTTTTAACCTGGGGGGCCAAGCACATGCTTCCTTTAATGCCCATGAAGATGGATACCCTAGTTCATCTACATACATGCCTGCAACCCCTGTGAGGTACAATTTTGATGATGAGCCAAACCGTTCCTCAGGAAAAGCTGTTGTGGGCTGGCTCAAGCTCAAGGCAGCTTTGAGGTGGGGCATATTTATTCGGAAGAAGGCTGCCGAGAGACGGGCACAACTCGTTGAATTGGATGACTCGTAG	1836	0.4466	MNGRYVERSSGVAREKRSLDSSSAEEGQPDRKRPALASVIVEALKVDSLQKLCSSLEPILRRVVSEEVERALAKLGPAKLTGSSSPKRIEGPDGKNLQLHFKTRLSLPLFTGGKVEGEQGATVHIVLIDANTGHVVTSGPESCVKLDVIVLEGDFNNEDDDTWSEDEFESHIVKEREGKRPLLTGDLQVTLKEGVGTLGELTFTDNSSWIRSRKFRLGLKVASGYCERMRIREAKTEAFTVKDHRGELYKKHYPPALNDEVWRLEKIGKDGSFHKRLNKAGIYTVEDFLRLVVRDPQRLRNILGSGMSNKMWDSLVEHAKTCVLSGKLYVYYPDDARNVGVVFNNIYELGGLIASDQYYSADSLSESQKVYVDTLVKKAYDNWMHVIEYDGKSLLNYSQDKTLDTAHRQAQMGPQEYSNSFPQISIPSYHDGTTTRYSMQPPNANHNSSIQFDDNAFSIQNQLISVSHQAQLPTNENGLTLGPLQSATHGFQTASISNPTYRGVEDFFPEEEIRIRSHEMLENEDMQHLLRIFNLGGQAHASFNAHEDGYPSSSTYMPATPVRYNFDDEPNRSSGKAVVGWLKLKAALRWGIFIRKKAAERRAQLVELDDS	611

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gabi2755g00007	611	PANTHER	OS02G0177800 PROTEIN	15	526	IPR012416	GO:0005516
	Gabi2755g00007	611	Pfam	Calmodulin binding protein-like N-terminal domain	97	244	IPR046831	-
	Gabi2755g00007	611	MobiDBLite	consensus disorder prediction	1	33	-	-
	Gabi2755g00007	611	Pfam	Calmodulin binding protein C-terminal domain	327	389	IPR046829	-
	Gabi2755g00007	611	Pfam	Calmodulin binding protein central domain	256	322	IPR046830	-
	Gabi2755g00007	611	MobiDBLite	consensus disorder prediction	9	32	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gabi2755g00007	Gabi-Chr2755	147531	153413	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gabi2755g00007	14	606	Calmodulin-binding Proteins	AT5G57580	63.823	0.0	776

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gabi2755g00007	-		-	gmx:100812605	1049.65