Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2754g00025 ATGTCAGAATCAGATATTTCCCCTGCTTTCAACACACCCAGATTGGTTGTCAAGAAGGTTTTGGCCAGATCTCAGCACGAAGGGGATGGAGCAGTTGTCAGGAGAGGCATTGGAAGAAGCGAGTTGAAGAACTTGGATCCCTTTCTAATGCTGGATCACTTCTCAGTATCTCCTCCTGGAGGATTTCCTGATCATCCACACAGAGGTTTTGAGACCGTGACCTACATGCTAGAGGGAGGCATAACTCACCAAGATTTTGCTGGACACAAGGGTACAATAAGAACTGGGGATGTTCAGTGGATGACCGCAGGCAGAGGAATAATTCACTCTGAAATGCCAGCAGAAGCAAGCAACAAGGGATTGCAGCTTTGGATCAATTTATCATCCAATGACAAAATGATTGAACCTAATTATCAAGAACTTCCCAGTGAGAACATACCGGGAGCAGAAAAAGATGGGGTTGAAGTGAGAGTGATAGCAGGAGAAGCAATGGGAGTGCGTTCTCCTGTGTACACACGAACTCCATCCATGTTCCTTGATTTCTCAATGATGCCAGGAGCTGTGTTGCATCAGAGTATTCAAGAGTCATGGAATTCCTTTGTTTATGTAATTGAAGGGGAAGGAGTGTTTGGGTCTCCGAGCTCGTCACCAAATATAGCACACCATGTCCTGGTTTTGGGTCAAGGTGATGGCCTCAGTGTGTGGAATAACTCTTCGAACCCTTTGAGGTTTGTGCTGATTGGAGGACAGCCAATTAACGAACCAGTGGCTCAGTATGGGCCTTTTGTGATGAATACACAGTCTGAAATTGAGAAAACTATTGAAGACTATCAATATGGCAAGAATGGCTTTGAGATGAAGAAATATTGGAGGTCTCAATAG 882 0.4478 MSESDISPAFNTPRLVVKKVLARSQHEGDGAVVRRGIGRSELKNLDPFLMLDHFSVSPPGGFPDHPHRGFETVTYMLEGGITHQDFAGHKGTIRTGDVQWMTAGRGIIHSEMPAEASNKGLQLWINLSSNDKMIEPNYQELPSENIPGAEKDGVEVRVIAGEAMGVRSPVYTRTPSMFLDFSMMPGAVLHQSIQESWNSFVYVIEGEGVFGSPSSSPNIAHHVLVLGQGDGLSVWNNSSNPLRFVLIGGQPINEPVAQYGPFVMNTQSEIEKTIEDYQYGKNGFEMKKYWRSQ 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2754g00025 293 Gene3D Jelly Rolls 27 278 IPR014710 -
Gabi2754g00025 293 Pfam Pirin 34 125 IPR003829 -
Gabi2754g00025 293 PANTHER PIRIN-RELATED 2 293 IPR012093 -
Gabi2754g00025 293 PIRSF Pirin 12 291 IPR012093 -
Gabi2754g00025 293 SUPERFAMILY RmlC-like cupins 14 291 IPR011051 -
Gabi2754g00025 293 CDD cupin_pirin_N 31 127 - -
Gabi2754g00025 293 FunFam pirin 27 158 - -
Gabi2754g00025 293 CDD cupin_pirin_C 175 251 - -
Gabi2754g00025 293 Gene3D Jelly Rolls 147 252 IPR014710 -
Gabi2754g00025 293 Pfam Pirin C-terminal cupin domain 178 283 IPR008778 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2754g00025 Gabi-Chr2754 206527 207993 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2754g00025 11 288 Calmodulin-binding Proteins AT3G59220 64.643 3.65e-133 377