Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2754g00021 ATGGAAGGCATGATATCGATGAAGGGAAAAGGGAAAAAGAAAGGTCTATTGAGCAAAACATGGGAGCGATGTAAGTCCGTAGGAAGAGGACGCAAGGGTTCATCCTCATCCAAGGCGGCTATTGCTTCCCTTTCTCTGACAACAACAACAACAAGGAGCAAATCGTGGCCAAGCCATGATCAGGAGGAAGAAGAAAAGCGAGGAAAGAAAGGGAGAGGGAGAAGTGTGGCCCCACAAGGTTGCTTCTCGGTGTATGTTGGGCCACAAATGCAAAGGTTCGTGATCAAAACTGAATACGCAAACCACCCTTTGTTCAAGATGTTGCTGGAAGAAGCAGAGTCAGAATATGGTTATAGCAGCCAAGGCCCTTTGGCACTTCCTTGCAACGTTGATCTATTTTACAAGGTGTTGATGGAAATGGATGATGAAGCCACTGCTACTACTACTACTCAACAAACTCATCGAGGCTGTGCTAATTTTGGGAAGCGTTCTCGTTCTTATCATCTTCTTAGCCCTTCGCGGATGCTTGCCATCAACCCCTTCTGA 546 0.4652 MEGMISMKGKGKKKGLLSKTWERCKSVGRGRKGSSSSKAAIASLSLTTTTTRSKSWPSHDQEEEEKRGKKGRGRSVAPQGCFSVYVGPQMQRFVIKTEYANHPLFKMLLEEAESEYGYSSQGPLALPCNVDLFYKVLMEMDDEATATTTTQQTHRGCANFGKRSRSYHLLSPSRMLAINPF 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2754g00021 181 Pfam Auxin responsive protein 55 137 IPR003676 GO:0009733
Gabi2754g00021 181 MobiDBLite consensus disorder prediction 15 29 - -
Gabi2754g00021 181 MobiDBLite consensus disorder prediction 56 72 - -
Gabi2754g00021 181 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 62 137 IPR003676 GO:0009733
Gabi2754g00021 181 MobiDBLite consensus disorder prediction 1 76 - -
Gabi2754g00021 181 MobiDBLite consensus disorder prediction 30 55 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2754g00021 Gabi-Chr2754 174813 175417 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2754g00021 77 152 Calmodulin-binding Proteins AT3G43120 40.789 7.02e-18 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2754g00021 K14488 - zju:107417631 163.31