Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2754g00019 ATGGGTTGCTTCTCGTGTTTCGATTCGACTTCAACACAGGATCACAACCTCAATTCTCAGCTGGATCAGGATCAGAATCAGAATCAGAATCAGGATCAGGATCAGGATCACCGTAACCGTAACCGTAACCGTAACCAGCACCAACCCAATCCAACCCTCCCTTCTCATATTTCCAGATTGCCCTCTGACAAGTTACGGTCCAGAAGTAATGGAGGTTCCAAAAGGGAACTGCCCCCTCTCAAGGATGGACCCGCTGTCCAAATTGCTGCTCAAACTTTTACTTTCCGTGAACTTGCAGCTGCAACAAAAAACTTTAGACCAGAGTCCTTTGTAGGGGAAGGTGGTTTTGGAAGGGTGTACAAAGGAAGGCTGGAAAGCACGGGTCAGATAGTTGCTGTTAAACAATTGGACAAAAATGGTCTTCAGGGTAATCGAGAATTCCTTGTAGAGGTTCTCATGCTCAGTCTTCTACATCATCCAAACCTTGTGAACCTCATTGGATACTGTGCGGATGGGGATCAACGCCTCCTCGTTTATGATTTTATGCCATTGGGATCATTGGAAGATCACCTTCACGATCTTCCCCCTGATAAGGAACCACTAGATTGGAACACTAGGATGAAAGTAGCTGCTGGTGCTGCTAAAGGATTAGAATACCTGCATGATGAGGCAAATCCTCCTGTCATTTATAGAGACTTCAAATCATCTAATATATTACTTGGTGAAGGATACCACCCAAAGCTTTCTGACTTTGGTCTTGCAAAGCTTGGTCCTGTTGGTGACAAATCACACGTTTCTACCCGTGTGATGGGAACTTATGGTTATTGTGCTCCTGAGTATGCTATGACCGGACAACTGACTGCAAAGTCAGATGTATATAGTTTTGGGGTGGTCTTCTTAGAGCTGGTTACTGGCCGTAAAGCAATCGATAGCACCCAGCCCCATGGAGAACAAAACCTTGTCAAATGGGCACGTCCACTGTTTAATGACCGCAGGAAATTTTCAAAGTTGGCTGATCCAAGGCTGCAGGGGCGATTTCCCATGAGGGGTCTTTACCAGGCTCTAGCTGTGGCATCAATGTGCATTCAAGAATCAGCTGCTACACGTCCTATGATTGGAGATGTGGTGACAGCCCTCTCTTATCTGGTCAACCAGGCATATGACCCTAACAATGCTGGGAATGATAAAAGGAACAGAGATGATAAAGGTGGAAGAATAATGAAAAATGATGAAGCTGCAGGATCTGGACGCAGATGGGATTTGGAAGGATCCGAGAAAGATGACTCCCCACGAGAAACTGCGAGGATGTTAAACAGAGATCTTGATAGAGAACGTGCCGTGGCTGAAGCCAAGATGTGGGGAGAGAACTTGAGAGAAAAAAGAAGACAAAGTGTGCAGCAGGGCAGTTTTGATGGTTCTAACGCTTAA 1428 0.4573 MGCFSCFDSTSTQDHNLNSQLDQDQNQNQNQDQDQDHRNRNRNRNQHQPNPTLPSHISRLPSDKLRSRSNGGSKRELPPLKDGPAVQIAAQTFTFRELAAATKNFRPESFVGEGGFGRVYKGRLESTGQIVAVKQLDKNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYDFMPLGSLEDHLHDLPPDKEPLDWNTRMKVAAGAAKGLEYLHDEANPPVIYRDFKSSNILLGEGYHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTAKSDVYSFGVVFLELVTGRKAIDSTQPHGEQNLVKWARPLFNDRRKFSKLADPRLQGRFPMRGLYQALAVASMCIQESAATRPMIGDVVTALSYLVNQAYDPNNAGNDKRNRDDKGGRIMKNDEAAGSGRRWDLEGSEKDDSPRETARMLNRDLDRERAVAEAKMWGENLREKRRQSVQQGSFDGSNA 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2754g00019 475 ProSitePatterns Serine/Threonine protein kinases active-site signature. 228 240 IPR008271 GO:0004672|GO:0006468
Gabi2754g00019 475 ProSiteProfiles Protein kinase domain profile. 105 382 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2754g00019 475 MobiDBLite consensus disorder prediction 387 440 - -
Gabi2754g00019 475 MobiDBLite consensus disorder prediction 1 83 - -
Gabi2754g00019 475 Gene3D Transferase(Phosphotransferase) domain 1 182 404 - -
Gabi2754g00019 475 FunFam Serine/threonine-protein kinase PBS1 182 398 - -
Gabi2754g00019 475 ProSitePatterns Protein kinases ATP-binding region signature. 111 134 IPR017441 GO:0005524
Gabi2754g00019 475 PANTHER OS07G0668900 PROTEIN 3 394 - -
Gabi2754g00019 475 FunFam Serine/threonine-protein kinase PBS1 79 181 - -
Gabi2754g00019 475 MobiDBLite consensus disorder prediction 455 475 - -
Gabi2754g00019 475 Gene3D Phosphorylase Kinase; domain 1 74 181 - -
Gabi2754g00019 475 CDD STKc_IRAK 111 379 - -
Gabi2754g00019 475 MobiDBLite consensus disorder prediction 393 440 - -
Gabi2754g00019 475 SUPERFAMILY Protein kinase-like (PK-like) 90 377 IPR011009 -
Gabi2754g00019 475 Pfam Protein kinase domain 108 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi2754g00019 475 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2754g00019 Gabi-Chr2754 158799 164339 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2754g00019 1 462 Glycoside Hydrolase AT3G07070 53.648 8.24e-165 470
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Gabi2754g00019 Pkinase 1.9e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2754g00019 K13430 - gmx:100305422 793.497