Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi2754g00014 ATGGAGAAGCTCAATTTTGTGAAGAATGGGGAACTTAGATTGCCTCCTGGATTCCGTTTCCACCCGACTGATGAGGAACTTGTTTTGCAATACTTGAAGCGTAAGGTCTTCTCTTCCCCTTTGCCGGCCTCTTTTATTCCTGAGGTTGATGTTTGCAAGTCTGATCCTTGGGATTTGCCAGGTGATTTGGAGCAAGAGAGGTACTTCTTCAGCACGAAGGAGGCCAAATATCCTAATGGGAACAGATCCAACAGAGCCACCAACTCGGGTTATTGGAAGGCAACAGGTTTGGACAAACAAATTCTAACTTCAAAAGGGAACAACCAAGTTGTGGGGATGAAGAAGACTCTCGTTTTCTACAGAGGCAAGCCTCCTCATGGTTCAAGAACTGATTGGATCATGCACGAATATCGCCTCCTCACCACCACCACCACCTCTCACTCTCACGCTCACACTCAGACCCCTCTGCTTCCCGTGGAAAATTGGGTTCTGTGTCGGATATTTTGGAAGAGGAGAGGTGCTAAAAACGGGGACGACAGAGACGCTTTGAGACCAACCCTTGATAACATTACCCGCAAGGTGAGGAACTCTAGGATGGTTTTCTATGACTTCTTGGCACAAAACAAGACTGATTTAAACCGTGTACCTGCTTCCTCATCCTCCGGCACCAGTGGAATCACTGAGCTTTCCACCAATGACAATGAATCAGATGAACATGAAGAGAGCAGTAGCTCCAACACCTTCCCTTATTTTAGAAGAAAACCTTAA 768 0.4648 MEKLNFVKNGELRLPPGFRFHPTDEELVLQYLKRKVFSSPLPASFIPEVDVCKSDPWDLPGDLEQERYFFSTKEAKYPNGNRSNRATNSGYWKATGLDKQILTSKGNNQVVGMKKTLVFYRGKPPHGSRTDWIMHEYRLLTTTTTSHSHAHTQTPLLPVENWVLCRIFWKRRGAKNGDDRDALRPTLDNITRKVRNSRMVFYDFLAQNKTDLNRVPASSSSGTSGITELSTNDNESDEHEESSSSNTFPYFRRKP 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi2754g00014 255 MobiDBLite consensus disorder prediction 213 231 - -
Gabi2754g00014 255 Pfam No apical meristem (NAM) protein 15 139 IPR003441 GO:0003677|GO:0006355
Gabi2754g00014 255 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 13 227 - -
Gabi2754g00014 255 MobiDBLite consensus disorder prediction 213 255 - -
Gabi2754g00014 255 Gene3D NAC domain 23 174 IPR036093 GO:0003677|GO:0006355
Gabi2754g00014 255 ProSiteProfiles NAC domain profile. 14 170 IPR003441 GO:0003677|GO:0006355
Gabi2754g00014 255 SUPERFAMILY NAC domain 10 170 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi2754g00014 Gabi-Chr2754 103582 105467 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi2754g00014 1 248 NAC Transcription Factor Family AT5G13180 58.175 8.55e-95 277
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gabi2754g00014 NAM 1.4e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi2754g00014 - - cave:132177524 377.481